RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.41□□□□□ -0.268e-8■■■■□ 25
TM9SF4-203ENST00000417389 RPAP1Q9BWH6 1393 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 MAP4K4O95819 1239 aaPredicted RBP13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 USP5P45974 858 aa13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 RHBDL3P58872 404 aa13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 DYNLL1P63167 89 aaKnown RBP13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 HDAC1Q13547 482 aaPredicted RBP13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 VGLL4Q14135 290 aa13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 MAP3K11Q16584 847 aa13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 B4GALNT3Q6L9W6 998 aa13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 ADGRA1Q86SQ6 560 aa13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 MAPKAPK5Q8IW41 473 aa13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 DDX4Q9NQI0 724 aaKnown RBP13.4□□□□□ -0.26
TM9SF4-203ENST00000417389 AKAP11Q9UKA4 1901 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 MAGEB6P1A0A0J9YX57 407 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 ERC2O15083 957 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 CA12O43570 354 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 IGSF3O75054 1194 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 LBX1P52954 281 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 SREBF2Q12772 1141 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 SPRYD7Q5W111 196 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 ZKSCAN4Q969J2 545 aaPredicted RBP13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 OPTNQ96CV9 577 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 HAUS7Q99871 368 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
TM9SF4-203ENST00000417389 MAST2Q6P0Q8 1798 aa13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 TRPA1O75762 1119 aa13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 PDE6AP16499 860 aa13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-203ENST00000417389 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 ZBTB48P10074 688 aaPredicted RBP13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 MX1P20591 662 aa13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 INPP5BP32019 993 aa13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 PPP4CP60510 307 aa13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 TMED8Q6PL24 325 aaPredicted RBP13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 SH3BP5LQ7L8J4 393 aa13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 PICK1Q9NRD5 415 aa13.37□□□□□ -0.27
TM9SF4-203ENST00000417389 HLA-DOAP06340 250 aa13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 OTUD7AQ8TE49 926 aaPredicted RBP13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 CRNKL1Q9BZJ0 848 aaKnown RBP13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 RNF186Q9NXI6 227 aa13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 FLT1P17948 1338 aa13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 TTC41PQ6P2S7 1318 aa13.36□□□□□ -0.27
TM9SF4-203ENST00000417389 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 RFX7Q2KHR2 1363 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 OTUD7BQ6GQQ9 843 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 DHX36Q9H2U1 1008 aaKnown RBP13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 PALD1Q9ULE6 856 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 SNCAIPQ9Y6H5 919 aa13.35□□□□□ -0.27
TM9SF4-203ENST00000417389 MYO5AQ9Y4I1 1855 aaKnown RBP13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 MBD4O95243 580 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 IGHDP01880 384 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 ADD2P35612 726 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 GTF2A2P52657 109 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 INHBEP58166 350 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 SLFNL1Q499Z3 407 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 DDRGK1Q96HY6 314 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
TM9SF4-203ENST00000417389 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 SPDYE5A6NIY4 337 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 GJA5P36382 358 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 TM4SF4P48230 202 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 SNAPC2Q13487 334 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 CCL15Q16663 113 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 COL13A1Q5TAT6 717 aaPredicted RBP13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 SCYL3Q8IZE3 742 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 LCORLQ8N3X6 602 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 SAGE1Q9NXZ1 904 aa13.33□□□□□ -0.28
TM9SF4-203ENST00000417389 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 DOCK2Q92608 1830 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 TCRBV5S4A2TA0A5A2 114 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 CTNND1O60716 968 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms