RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 WASHC5Q12768 1159 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 LMNTD2Q8IXW0 634 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 GPCPD1Q9NPB8 672 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 MAGEA10P43363 369 aaPredicted RBP9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 SH3BGRP55822 239 aaPredicted RBP9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 MPP3Q13368 585 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 TRIM29Q14134 588 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 IQCB1Q15051 598 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 IL17REQ8NFR9 667 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 IFT122Q9HBG6 1241 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 SEL1LQ9UBV2 794 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 RANBP1P43487 201 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 GNAI1P63096 354 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 SPATA21Q7Z572 469 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 NUTM1Q86Y26 1132 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 EXOC1Q9NV70 894 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 TMOD3Q9NYL9 352 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 ATP8A1Q9Y2Q0 1164 aa9.72□□□□□ -0.85
FNDC3B-203ENST00000416957 E2F6O75461 281 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 CABP4P57796 275 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 TEFQ10587 303 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 FAM114A1Q8IWE2 563 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 NACC2Q96BF6 587 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 RBM17Q96I25 401 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 TRIM37O94972 964 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 ELF1P32519 619 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 ANKRD18AQ8IVF6 992 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 RPS6KC1Q96S38 1066 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 COMMD8Q9NX08 183 aa9.71□□□□□ -0.85
FNDC3B-203ENST00000416957 FAM160A1Q05DH4 1040 aa9.71□□□□□ -0.86
FNDC3B-203ENST00000416957 SFSWAPQ12872 951 aaKnown RBP9.71□□□□□ -0.86
FNDC3B-203ENST00000416957 TAF7Q15545 349 aaPredicted RBP9.71□□□□□ -0.86
FNDC3B-203ENST00000416957 ARHGAP27Q6ZUM4 889 aa9.71□□□□□ -0.86
FNDC3B-203ENST00000416957 USP33Q8TEY7 942 aa9.71□□□□□ -0.86
FNDC3B-203ENST00000416957 MMADHCQ9H3L0 296 aaPredicted RBP9.71□□□□□ -0.86
FNDC3B-203ENST00000416957 CCDC39Q9UFE4 941 aa9.71□□□□□ -0.86
FNDC3B-203ENST00000416957 ZNF189O75820 626 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 GCFC2P16383 781 aaKnown RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 GBP6Q6ZN66 633 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 PARD3BQ8TEW8 1205 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 MRRFQ96E11 262 aaKnown RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 BARX2Q9UMQ3 279 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 HEG1Q9ULI3 1381 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 MTA2O94776 668 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 HOXB7P09629 217 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 DEUP1Q05D60 604 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 TMED1Q13445 227 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 TEX35Q5T0J7 233 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 LMBRD2Q68DH5 695 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 MPRIPQ6WCQ1 1025 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 CCDC102AQ96A19 550 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 DIAPH3Q9NSV4 1193 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 PRR12Q9ULL5 1215 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 IKBKGQ9Y6K9 419 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 CACNA1FO60840 1977 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 EIF3FO00303 357 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 CHL1O00533 1208 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 PACS1Q6VY07 963 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 NEK11Q8NG66 645 aa9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 ALDH8A1Q9H2A2 487 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-203ENST00000416957 HOXD10P28358 340 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 KRT72Q14CN4 511 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 RRP12Q5JTH9 1297 aaKnown RBP9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 FILIP1Q7Z7B0 1213 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 IFNLR1Q8IU57 520 aaPredicted RBP9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 STAG1Q8WVM7 1258 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 TRPV5Q9NQA5 729 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 CLIP2Q9UDT6 1046 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 PLSCR1O15162 318 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 GCKP35557 465 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 USP8P40818 1118 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 CLK1P49759 484 aaKnown RBP9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 CENPTQ96BT3 561 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 DHX36Q9H2U1 1008 aaKnown RBP9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 LGR6Q9HBX8 967 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 FGFR1OPO95684 399 aaKnown RBP9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 TSR1Q2NL82 804 aaKnown RBP9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 COBLL1Q53SF7 1204 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 PLPP6Q8IY26 295 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 RSRC1Q96IZ7 334 aaKnown RBP9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 SCYL1Q96KG9 808 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 CAPS2Q9BXY5 557 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 HOXC10Q9NYD6 342 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 C4BP0C0L5 1744 aa9.69□□□□□ -0.86
FNDC3B-203ENST00000416957 MCM10Q7L590 875 aa9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 TRMT2AQ8IZ69 625 aaKnown RBP9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 EZH1Q92800 747 aaPredicted RBP9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 PALLDQ8WX93 1383 aa9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 MSL3P1P0C860 447 aa9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 HARSP12081 509 aaKnown RBP9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 RAB27AP51159 221 aa9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 ZNF131P52739 623 aa9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 ADCY1Q08828 1119 aa9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 SLC27A3Q5K4L6 730 aa9.68□□□□□ -0.86
FNDC3B-203ENST00000416957 PIBF1Q8WXW3 757 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms