RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 DDTLA6NHG4 134 aaPredicted RBP18.64■□□□□ 0.57
CRAT-203ENST00000415948 MYO1BO43795 1136 aa18.64■□□□□ 0.57
CRAT-203ENST00000415948 ZNF589Q86UQ0 364 aaPredicted RBP18.64■□□□□ 0.57
CRAT-203ENST00000415948 MAPKAPK5Q8IW41 473 aa18.64■□□□□ 0.57
CRAT-203ENST00000415948 TGFBRAP1Q8WUH2 860 aa18.64■□□□□ 0.57
CRAT-203ENST00000415948 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.57
CRAT-203ENST00000415948 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.64■□□□□ 0.57
CRAT-203ENST00000415948 MKRN1Q9UHC7 482 aaKnown RBP18.64■□□□□ 0.57
CRAT-203ENST00000415948 GTF3C3Q9Y5Q9 886 aa18.64■□□□□ 0.57
CRAT-203ENST00000415948 IGSF3O75054 1194 aa18.63■□□□□ 0.57
CRAT-203ENST00000415948 SLC4A8Q2Y0W8 1093 aa18.63■□□□□ 0.57
CRAT-203ENST00000415948 FKBP1CQ5VVH2 108 aa18.63■□□□□ 0.57
CRAT-203ENST00000415948 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
CRAT-203ENST00000415948 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
CRAT-203ENST00000415948 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
CRAT-203ENST00000415948 FAM83AQ86UY5 434 aa18.62■□□□□ 0.57
CRAT-203ENST00000415948 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
CRAT-203ENST00000415948 OSBPL5Q9H0X9 879 aaPredicted RBP18.62■□□□□ 0.57
CRAT-203ENST00000415948 COL2A1P02458 1487 aaPredicted RBP18.62■□□□□ 0.57
CRAT-203ENST00000415948 ATAD5Q96QE3 1844 aa18.61■□□□□ 0.57
CRAT-203ENST00000415948 GPAA1O43292 621 aa18.61■□□□□ 0.57
CRAT-203ENST00000415948 CYP2D6P10635 497 aa18.61■□□□□ 0.57
CRAT-203ENST00000415948 VPS53Q5VIR6 699 aa18.61■□□□□ 0.57
CRAT-203ENST00000415948 FAM151AQ8WW52 585 aa18.61■□□□□ 0.57
CRAT-203ENST00000415948 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
CRAT-203ENST00000415948 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
CRAT-203ENST00000415948 ENTPD3O75355 529 aa18.6■□□□□ 0.57
CRAT-203ENST00000415948 BAG3O95817 575 aa18.6■□□□□ 0.57
CRAT-203ENST00000415948 PRKG1Q13976 671 aa18.6■□□□□ 0.57
CRAT-203ENST00000415948 DNAJC18Q9H819 358 aa18.6■□□□□ 0.57
CRAT-203ENST00000415948 TMOD2Q9NZR1 351 aa18.6■□□□□ 0.57
CRAT-203ENST00000415948 LAMA4Q16363 1823 aa18.59■□□□□ 0.57
CRAT-203ENST00000415948 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
CRAT-203ENST00000415948 ZFYP08048 801 aaPredicted RBP18.59■□□□□ 0.57
CRAT-203ENST00000415948 ZSCAN25Q6NSZ9 544 aa18.59■□□□□ 0.57
CRAT-203ENST00000415948 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
CRAT-203ENST00000415948 PPP2R3BQ9Y5P8 575 aa18.59■□□□□ 0.57
CRAT-203ENST00000415948 GSG1L2A8MUP6 293 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
CRAT-203ENST00000415948 CHMLP26374 656 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 APLP1P51693 650 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 TNFAIP1Q13829 316 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 RRP1BQ14684 758 aaKnown RBP18.58■□□□□ 0.56
CRAT-203ENST00000415948 BMP2KLQ5H9B9 411 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 TMED8Q6PL24 325 aaPredicted RBP18.58■□□□□ 0.56
CRAT-203ENST00000415948 AIDAQ96BJ3 306 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 NOL10Q9BSC4 688 aaKnown RBP18.58■□□□□ 0.56
CRAT-203ENST00000415948 PALD1Q9ULE6 856 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 DOCK1Q14185 1865 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.56
CRAT-203ENST00000415948 PLCG2P16885 1265 aa18.57■□□□□ 0.56
CRAT-203ENST00000415948 SHROOM1Q2M3G4 852 aaPredicted RBP18.57■□□□□ 0.56
CRAT-203ENST00000415948 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
CRAT-203ENST00000415948 MIGA2Q7L4E1 593 aa18.57■□□□□ 0.56
CRAT-203ENST00000415948 SLC4A4Q9Y6R1 1079 aa18.57■□□□□ 0.56
CRAT-203ENST00000415948 MYH8P13535 1937 aa18.57■□□□□ 0.56
CRAT-203ENST00000415948 USP2O75604 605 aaPredicted RBP18.56■□□□□ 0.56
CRAT-203ENST00000415948 USP5P45974 858 aa18.56■□□□□ 0.56
CRAT-203ENST00000415948 TNNI2P48788 182 aa18.56■□□□□ 0.56
CRAT-203ENST00000415948 PLCD1P51178 756 aa18.56■□□□□ 0.56
CRAT-203ENST00000415948 CRNKL1Q9BZJ0 848 aaKnown RBP18.56■□□□□ 0.56
CRAT-203ENST00000415948 GBA2Q9HCG7 927 aaPredicted RBP18.56■□□□□ 0.56
CRAT-203ENST00000415948 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.56■□□□□ 0.56
CRAT-203ENST00000415948 UBE2Q2LH0YL09 131 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 HSPA6P17066 643 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 JAG1P78504 1218 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 CLMNQ96JQ2 1002 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 HELLSQ9NRZ9 838 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 TACC3Q9Y6A5 838 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 THSD7BQ9C0I4 1608 aa18.55■□□□□ 0.56
CRAT-203ENST00000415948 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
CRAT-203ENST00000415948 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
CRAT-203ENST00000415948 MCMDC2Q4G0Z9 681 aa18.54■□□□□ 0.56
CRAT-203ENST00000415948 SAPCD2Q86UD0 394 aa18.54■□□□□ 0.56
CRAT-203ENST00000415948 TLL2Q9Y6L7 1015 aa18.54■□□□□ 0.56
CRAT-203ENST00000415948 GREB1LQ9C091 1923 aaPredicted RBP18.53■□□□□ 0.56
CRAT-203ENST00000415948 PHF20L1A8MW92 1017 aa18.53■□□□□ 0.56
CRAT-203ENST00000415948 MAP3K10Q02779 954 aa18.53■□□□□ 0.56
CRAT-203ENST00000415948 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
CRAT-203ENST00000415948 ZSCAN29Q8IWY8 852 aaPredicted RBP18.53■□□□□ 0.56
CRAT-203ENST00000415948 SLC44A5Q8NCS7 719 aa18.53■□□□□ 0.56
CRAT-203ENST00000415948 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
CRAT-203ENST00000415948 DIAPH3Q9NSV4 1193 aa18.53■□□□□ 0.56
CRAT-203ENST00000415948 ANGEL1Q9UNK9 670 aaKnown RBP18.53■□□□□ 0.56
CRAT-203ENST00000415948 INPP5BP32019 993 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 MAP3K11Q16584 847 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 LDLRAD1Q5T700 205 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.52■□□□□ 0.56
CRAT-203ENST00000415948 METTL16Q86W50 562 aaKnown RBP18.52■□□□□ 0.56
CRAT-203ENST00000415948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.52■□□□□ 0.56
CRAT-203ENST00000415948 NKX2-3Q8TAU0 364 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 KLRG1Q96E93 195 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 CREBZFQ9NS37 354 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 MCM9Q9NXL9 1143 aa18.52■□□□□ 0.56
CRAT-203ENST00000415948 PTPRFP10586 1907 aa18.51■□□□□ 0.55
CRAT-203ENST00000415948 USP17L12C9JPN9 530 aa18.51■□□□□ 0.55
CRAT-203ENST00000415948 USP17L21D6R901 530 aa18.51■□□□□ 0.55
CRAT-203ENST00000415948 GABPAQ06546 454 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms