RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SOX10P56693 466 aa25.08■■□□□ 1.61
PTPRU-203ENST00000415600 TNNI3KQ59H18 835 aa25.08■■□□□ 1.61
PTPRU-203ENST00000415600 NOL9Q5SY16 702 aaKnown RBP25.08■■□□□ 1.61
PTPRU-203ENST00000415600 EFCC1Q9HA90 598 aa25.08■■□□□ 1.61
PTPRU-203ENST00000415600 PICK1Q9NRD5 415 aa25.08■■□□□ 1.61
PTPRU-203ENST00000415600 FPGT-TNNI3KV9GXZ4 949 aa25.08■■□□□ 1.61
PTPRU-203ENST00000415600 GPR75-ASB3A0A0A6YYF3 556 aa25.07■■□□□ 1.6
PTPRU-203ENST00000415600 ZBTB7BO15156 539 aaPredicted RBP25.07■■□□□ 1.6
PTPRU-203ENST00000415600 IGSF3O75054 1194 aa25.07■■□□□ 1.6
PTPRU-203ENST00000415600 INPP5BP32019 993 aa25.07■■□□□ 1.6
PTPRU-203ENST00000415600 OTOP1Q7RTM1 612 aa25.07■■□□□ 1.6
PTPRU-203ENST00000415600 C1orf115Q9H7X2 142 aa25.06■■□□□ 1.6
PTPRU-203ENST00000415600 NPM3O75607 178 aaKnown RBP25.05■■□□□ 1.6
PTPRU-203ENST00000415600 KIF22Q14807 665 aa25.05■■□□□ 1.6
PTPRU-203ENST00000415600 FAM43AQ8N2R8 423 aa25.05■■□□□ 1.6
PTPRU-203ENST00000415600 CD99L2Q8TCZ2 262 aa25.05■■□□□ 1.6
PTPRU-203ENST00000415600 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
PTPRU-203ENST00000415600 MCAMP43121 646 aa25.05■■□□□ 1.6
PTPRU-203ENST00000415600 PICALMQ13492 652 aa25.05■■□□□ 1.6
PTPRU-203ENST00000415600 ERC1Q8IUD2 1116 aa25.05■■□□□ 1.6
PTPRU-203ENST00000415600 EXOC6Q8TAG9 804 aa25.05■■□□□ 1.6
PTPRU-203ENST00000415600 NSUN4Q96CB9 384 aaKnown RBP25.05■■□□□ 1.6
PTPRU-203ENST00000415600 BAG3O95817 575 aa25.04■■□□□ 1.6
PTPRU-203ENST00000415600 RLBP1P12271 317 aa25.04■■□□□ 1.6
PTPRU-203ENST00000415600 CHMP4BQ9H444 224 aaKnown RBP25.04■■□□□ 1.6
PTPRU-203ENST00000415600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.04■■□□□ 1.6
PTPRU-203ENST00000415600 BTBD19C9JJ37 291 aa25.03■■□□□ 1.6
PTPRU-203ENST00000415600 TLR2O60603 784 aa25.03■■□□□ 1.6
PTPRU-203ENST00000415600 PLCG2P16885 1265 aa25.03■■□□□ 1.6
PTPRU-203ENST00000415600 B4GALNT3Q6L9W6 998 aa25.03■■□□□ 1.6
PTPRU-203ENST00000415600 ZFPM1Q8IX07 1006 aa25.03■■□□□ 1.6
PTPRU-203ENST00000415600 ZNF512BQ96KM6 892 aaPredicted RBP25.03■■□□□ 1.6
PTPRU-203ENST00000415600 KCNH4Q9UQ05 1017 aa25.03■■□□□ 1.6
PTPRU-203ENST00000415600 RFX7Q2KHR2 1363 aa25.03■■□□□ 1.6
PTPRU-203ENST00000415600 CXCL11O14625 94 aa25.02■■□□□ 1.6
PTPRU-203ENST00000415600 HSP90AB4PQ58FF6 505 aa25.02■■□□□ 1.6
PTPRU-203ENST00000415600 PI16Q6UXB8 463 aa25.02■■□□□ 1.6
PTPRU-203ENST00000415600 TBC1D9Q6ZT07 1266 aa25.02■■□□□ 1.6
PTPRU-203ENST00000415600 ANKRD23Q86SG2 305 aa25.02■■□□□ 1.6
PTPRU-203ENST00000415600 SCYL3Q8IZE3 742 aa25.01■■□□□ 1.59
PTPRU-203ENST00000415600 PTPN22Q9Y2R2 807 aa25.01■■□□□ 1.59
PTPRU-203ENST00000415600 CTNND1O60716 968 aaKnown RBP25.01■■□□□ 1.59
PTPRU-203ENST00000415600 NAA16Q6N069 864 aaPredicted RBP25.01■■□□□ 1.59
PTPRU-203ENST00000415600 DBNDD2Q9BQY9 259 aa25.01■■□□□ 1.59
PTPRU-203ENST00000415600 RHBDL3P58872 404 aa25■■□□□ 1.59
PTPRU-203ENST00000415600 FASTKD5Q7L8L6 764 aaKnown RBP25■■□□□ 1.59
PTPRU-203ENST00000415600 DOCK2Q92608 1830 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 TBC1D12O60347 775 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 GNRH1P01148 92 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 MAP3K10Q02779 954 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 CEP85Q6P2H3 762 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 TEX11Q8IYF3 940 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 PANK1Q8TE04 598 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 CRBNQ96SW2 442 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 ATRNL1Q5VV63 1379 aa24.99■■□□□ 1.59
PTPRU-203ENST00000415600 DDTLA6NHG4 134 aaPredicted RBP24.98■■□□□ 1.59
PTPRU-203ENST00000415600 PHF20L1A8MW92 1017 aa24.98■■□□□ 1.59
PTPRU-203ENST00000415600 C20orf194Q5TEA3 1177 aa24.98■■□□□ 1.59
PTPRU-203ENST00000415600 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
PTPRU-203ENST00000415600 PARK7Q99497 189 aaKnown RBP24.98■■□□□ 1.59
PTPRU-203ENST00000415600 DDX4Q9NQI0 724 aaKnown RBP24.98■■□□□ 1.59
PTPRU-203ENST00000415600 SNRKQ9NRH2 765 aa24.98■■□□□ 1.59
PTPRU-203ENST00000415600 DDX19BQ9UMR2 479 aa24.98■■□□□ 1.59
PTPRU-203ENST00000415600 ZHX2Q9Y6X8 837 aa24.98■■□□□ 1.59
PTPRU-203ENST00000415600 PDHXO00330 501 aa24.97■■□□□ 1.59
PTPRU-203ENST00000415600 HMMRO75330 724 aa24.97■■□□□ 1.59
PTPRU-203ENST00000415600 SH3BP5LQ7L8J4 393 aa24.97■■□□□ 1.59
PTPRU-203ENST00000415600 NBPF11Q86T75 865 aa24.97■■□□□ 1.59
PTPRU-203ENST00000415600 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.97■■□□□ 1.59
PTPRU-203ENST00000415600 COL2A1P02458 1487 aaPredicted RBP24.97■■□□□ 1.59
PTPRU-203ENST00000415600 CERS3Q8IU89 383 aa24.97■■□□□ 1.59
PTPRU-203ENST00000415600 ZNF384Q8TF68 577 aa24.97■■□□□ 1.59
PTPRU-203ENST00000415600 PTPRAP18433 802 aa24.96■■□□□ 1.59
PTPRU-203ENST00000415600 TMED8Q6PL24 325 aaPredicted RBP24.96■■□□□ 1.59
PTPRU-203ENST00000415600 OSBPL5Q9H0X9 879 aaPredicted RBP24.96■■□□□ 1.59
PTPRU-203ENST00000415600 DHX36Q9H2U1 1008 aaKnown RBP24.96■■□□□ 1.59
PTPRU-203ENST00000415600 PRMT2P55345 433 aa24.95■■□□□ 1.58
PTPRU-203ENST00000415600 PDE3AQ14432 1141 aa24.95■■□□□ 1.58
PTPRU-203ENST00000415600 DBNLQ9UJU6 430 aaKnown RBP24.95■■□□□ 1.58
PTPRU-203ENST00000415600 LACTBP83111 547 aaPredicted RBP24.94■■□□□ 1.58
PTPRU-203ENST00000415600 RPAP2Q8IXW5 612 aaPredicted RBP24.94■■□□□ 1.58
PTPRU-203ENST00000415600 TBC1D2Q9BYX2 928 aa24.94■■□□□ 1.58
PTPRU-203ENST00000415600 HERC5Q9UII4 1024 aaKnown RBP24.94■■□□□ 1.58
PTPRU-203ENST00000415600 CYP2E1P05181 493 aaPredicted RBP24.93■■□□□ 1.58
PTPRU-203ENST00000415600 HOXD10P28358 340 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 ARMC5Q96C12 935 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 TRIM34Q9BYJ4 488 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 CCDC8Q9H0W5 538 aaPredicted RBP24.93■■□□□ 1.58
PTPRU-203ENST00000415600 AATFQ9NY61 560 aaKnown RBP eCLIP24.93■■□□□ 1.58
PTPRU-203ENST00000415600 PDE4DIPQ5VU43 2346 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 A0A0G2JLL6 359 aaPredicted RBP24.93■■□□□ 1.58
PTPRU-203ENST00000415600 ZAP70P43403 619 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 PPP4CP60510 307 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 SLC9C1Q4G0N8 1177 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 PRRT2Q7Z6L0 340 aaPredicted RBP24.93■■□□□ 1.58
PTPRU-203ENST00000415600 AACSQ86V21 672 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 EAF2Q96CJ1 260 aaPredicted RBP24.93■■□□□ 1.58
PTPRU-203ENST00000415600 PI4KBQ9UBF8 816 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 EXOC6BQ9Y2D4 811 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 SLC45A1Q9Y2W3 748 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms