RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 SDR42E1Q8WUS8 393 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 FAM227BQ96M60 508 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 FAM198AQ9UFP1 575 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 SLC4A4Q9Y6R1 1079 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
HLA-DMB-257ENST00000414017 AK9Q5TCS8 1911 aa12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 A0A0D9SFI3 127 aa12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 GPAA1O43292 621 aa12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 NF2P35240 595 aa12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 FAM151AQ8WW52 585 aa12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
HLA-DMB-257ENST00000414017 HIP1O00291 1037 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 ENTPD3O75355 529 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 FAM83AQ86UY5 434 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 CSRNP1Q96S65 589 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 OSBPL5Q9H0X9 879 aaPredicted RBP12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 HELLSQ9NRZ9 838 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 PPP2R3BQ9Y5P8 575 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 FLT1P17948 1338 aa12.53□□□□□ -0.4
HLA-DMB-257ENST00000414017 POLR3DP05423 398 aaPredicted RBP12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 SUPT20HL1Q3ZLR7 823 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 MCMDC2Q4G0Z9 681 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 BMP2KLQ5H9B9 411 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 FKBP1CQ5VVH2 108 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 STRBPQ96SI9 672 aaKnown RBP12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 TRIM34Q9BYJ4 488 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 MCM9Q9NXL9 1143 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 PALD1Q9ULE6 856 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.41
HLA-DMB-257ENST00000414017 DDTLA6NHG4 134 aaPredicted RBP12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 CHMLP26374 656 aa12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 TDO2P48775 406 aa12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 C1QTNF8P60827 252 aa12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 MOB2Q70IA6 237 aa12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 ZNF589Q86UQ0 364 aaPredicted RBP12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 STK11IPQ8N1F8 1099 aa12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 C2orf69Q8N8R5 385 aa12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 ABT1Q9ULW3 272 aaKnown RBP12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 PASKQ96RG2 1323 aa12.51□□□□□ -0.41
HLA-DMB-257ENST00000414017 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 HLA-DOAP06340 250 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 SLURP2P0DP57 97 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 CYP2D6P10635 497 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 GNAT2P19087 354 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 HTRA3P83110 453 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 SH3BP5LQ7L8J4 393 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 AMOTL1Q8IY63 956 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 CRACR2BQ8N4Y2 399 aaPredicted RBP12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 RUFY2Q8WXA3 655 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 GBA2Q9HCG7 927 aaPredicted RBP12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 ANGEL1Q9UNK9 670 aaKnown RBP12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
HLA-DMB-257ENST00000414017 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 MINDY4BA8MYZ0 360 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 UBE2Q2LH0YL09 131 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 PPP1R12BO60237 982 aaPredicted RBP12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 CDC45O75419 566 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 APLP1P51693 650 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 GRM1Q13255 1194 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 VPS53Q5VIR6 699 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 CST9Q5W186 159 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 ARMC9Q7Z3E5 817 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 HOOK2Q96ED9 719 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 NACAP1Q9BZK3 213 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 ATP8A2Q9NTI2 1148 aa12.49□□□□□ -0.41
HLA-DMB-257ENST00000414017 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 RPAP1Q9BWH6 1393 aaPredicted RBP12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 PATL2C9JE40 543 aaKnown RBP12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 USP17L12C9JPN9 530 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 USP17L21D6R901 530 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 HUNKP57058 714 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 EVX2Q03828 476 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 NAPBQ9H115 298 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 EPB41L4AQ9HCS5 686 aaPredicted RBP12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
HLA-DMB-257ENST00000414017 SSC5DA1L4H1 1573 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 IREB2P48200 963 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms