RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 USP44Q9H0E7 712 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 GREM2Q9H772 168 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 UTYO14607 1347 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 LTBP3Q9NS15 1303 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 RAB15P59190 212 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 FOXO4P98177 505 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
HCG27-202ENST00000414008 IRF5Q13568 498 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 INTS3Q68E01 1043 aaKnown RBP12.07□□□□□ -0.48
HCG27-202ENST00000414008 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 DDX60Q8IY21 1712 aaKnown RBP12.07□□□□□ -0.48
HCG27-202ENST00000414008 SUCLG2Q96I99 432 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
HCG27-202ENST00000414008 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 RNF181Q9P0P0 153 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
HCG27-202ENST00000414008 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 ESPNB1AK53 854 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 PRELPP51888 382 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 EPHA10Q5JZY3 1008 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 LMBR1LQ6UX01 489 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 PSMD1Q99460 953 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 TNNQ9UQP3 1299 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 CHMP3Q9Y3E7 222 aa12.06□□□□□ -0.48
HCG27-202ENST00000414008 ANKRD18BA2A2Z9 1011 aa12.05□□□□□ -0.48
HCG27-202ENST00000414008 ITGA6P23229 1130 aa12.05□□□□□ -0.48
HCG27-202ENST00000414008 SCARF1Q14162 830 aa12.05□□□□□ -0.48
HCG27-202ENST00000414008 DPP8Q6V1X1 898 aaPredicted RBP12.05□□□□□ -0.48
HCG27-202ENST00000414008 SLC51AQ86UW1 340 aa12.05□□□□□ -0.48
HCG27-202ENST00000414008 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
HCG27-202ENST00000414008 ZNF277Q9NRM2 450 aaPredicted RBP12.05□□□□□ -0.48
HCG27-202ENST00000414008 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
HCG27-202ENST00000414008 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
HCG27-202ENST00000414008 LAMB2P55268 1798 aa12.05□□□□□ -0.48
HCG27-202ENST00000414008 CHD4Q14839 1912 aa12.04□□□□□ -0.48
HCG27-202ENST00000414008 UPP2O95045 317 aa12.04□□□□□ -0.48
HCG27-202ENST00000414008 UBTFL1P0CB47 393 aaPredicted RBP12.04□□□□□ -0.48
HCG27-202ENST00000414008 BMP1P13497 986 aa12.04□□□□□ -0.48
HCG27-202ENST00000414008 IGHMBP2P38935 993 aaKnown RBP12.04□□□□□ -0.48
HCG27-202ENST00000414008 IFIT5Q13325 482 aaKnown RBP12.04□□□□□ -0.48
HCG27-202ENST00000414008 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
HCG27-202ENST00000414008 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
HCG27-202ENST00000414008 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
HCG27-202ENST00000414008 SUPT20HQ8NEM7 779 aa12.04□□□□□ -0.48
HCG27-202ENST00000414008 KIFC2Q96AC6 838 aa12.04□□□□□ -0.48
HCG27-202ENST00000414008 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
HCG27-202ENST00000414008 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
HCG27-202ENST00000414008 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
HCG27-202ENST00000414008 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
HCG27-202ENST00000414008 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
HCG27-202ENST00000414008 GPSM2P81274 684 aa12.03□□□□□ -0.48
HCG27-202ENST00000414008 VAC14Q08AM6 782 aa12.03□□□□□ -0.48
HCG27-202ENST00000414008 RABL6Q3YEC7 729 aaPredicted RBP12.03□□□□□ -0.48
HCG27-202ENST00000414008 MRPL14Q6P1L8 145 aaKnown RBP12.03□□□□□ -0.48
HCG27-202ENST00000414008 TMEM57Q8N5G2 664 aa12.03□□□□□ -0.48
HCG27-202ENST00000414008 MPHOSPH8Q99549 860 aa12.03□□□□□ -0.48
HCG27-202ENST00000414008 RTFDC1Q9BY42 306 aaPredicted RBP12.03□□□□□ -0.48
HCG27-202ENST00000414008 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
HCG27-202ENST00000414008 BICC1Q9H694 974 aaKnown RBP12.03□□□□□ -0.48
HCG27-202ENST00000414008 POTECB2RU33 542 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 GNAI3P08754 354 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 MEIS3Q99687 375 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 VPS33BQ9H267 617 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 ANKIB1Q9P2G1 1089 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.49
HCG27-202ENST00000414008 ERVH48-1M5A8F1 160 aa12.01□□□□□ -0.49
HCG27-202ENST00000414008 PPIP5K2O43314 1243 aa12.01□□□□□ -0.49
HCG27-202ENST00000414008 RLBP1P12271 317 aa12.01□□□□□ -0.49
HCG27-202ENST00000414008 TRIM46Q7Z4K8 759 aa12.01□□□□□ -0.49
HCG27-202ENST00000414008 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
HCG27-202ENST00000414008 ZNF784Q8NCA9 323 aaPredicted RBP12.01□□□□□ -0.49
HCG27-202ENST00000414008 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
HCG27-202ENST00000414008 TAF1P21675 1872 aa12.01□□□□□ -0.49
HCG27-202ENST00000414008 COL4A1P02462 1669 aa12□□□□□ -0.49
HCG27-202ENST00000414008 PLIN1O60240 522 aa12□□□□□ -0.49
HCG27-202ENST00000414008 AOC3Q16853 763 aa12□□□□□ -0.49
HCG27-202ENST00000414008 LDHAL6AQ6ZMR3 332 aa12□□□□□ -0.49
HCG27-202ENST00000414008 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
HCG27-202ENST00000414008 MEIOBQ8N635 442 aa12□□□□□ -0.49
HCG27-202ENST00000414008 GOLGA6L2Q8N9W4 650 aaPredicted RBP12□□□□□ -0.49
HCG27-202ENST00000414008 TBC1D16Q8TBP0 767 aa12□□□□□ -0.49
HCG27-202ENST00000414008 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
HCG27-202ENST00000414008 JDP2Q8WYK2 163 aa12□□□□□ -0.49
HCG27-202ENST00000414008 POM121Q96HA1 1249 aa12□□□□□ -0.49
HCG27-202ENST00000414008 ZNF594Q96JF6 807 aaPredicted RBP12□□□□□ -0.49
HCG27-202ENST00000414008 POLLQ9UGP5 575 aa12□□□□□ -0.49
HCG27-202ENST00000414008 GGA1Q9UJY5 639 aa12□□□□□ -0.49
HCG27-202ENST00000414008 LRRFIP2Q9Y608 721 aaKnown RBP12□□□□□ -0.49
HCG27-202ENST00000414008 ATP2B4P23634 1241 aa11.99□□□□□ -0.49
HCG27-202ENST00000414008 SOX11P35716 441 aa11.99□□□□□ -0.49
HCG27-202ENST00000414008 KIAA2012Q0VF49 1180 aa11.99□□□□□ -0.49
HCG27-202ENST00000414008 NIM1KQ8IY84 436 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms