RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 A6NJR5 290 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 LDHBP07195 334 aaKnown RBP10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 MS4A1P11836 297 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 NF2P35240 595 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 OS9Q13438 667 aaPredicted RBP10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 PDE3AQ14432 1141 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 CDC42EP5Q6NZY7 148 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 CCDC82Q8N4S0 544 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 CCDC102AQ96A19 550 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 CSRNP1Q96S65 589 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 PTPRFP10586 1907 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 GAKO14976 1311 aa10.52□□□□□ -0.73
HERPUD2-203ENST00000413517 GJA5P36382 358 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 MECOMQ03112 1051 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 NFIAQ12857 509 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 TNFAIP1Q13829 316 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 ARMC9Q7Z3E5 817 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 SPATA5Q8NB90 893 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 CCDC8Q9H0W5 538 aaPredicted RBP10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 SNRKQ9NRH2 765 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 FARP1Q9Y4F1 1045 aaPredicted RBP10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 PHIPQ8WWQ0 1821 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 RPAP1Q9BWH6 1393 aaPredicted RBP10.51□□□□□ -0.73
HERPUD2-203ENST00000413517 MYH1P12882 1939 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 PPP1R15BQ5SWA1 713 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 FKBP1CQ5VVH2 108 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 FAM83AQ86UY5 434 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 ZFPM1Q8IX07 1006 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 IL1RAPL2Q9NP60 686 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 PRDM10Q9NQV6 1147 aa10.5□□□□□ -0.73
HERPUD2-203ENST00000413517 DOCK1Q14185 1865 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 CYP2E1P05181 493 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 TCP10Q12799 353 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 AMHR2Q16671 573 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 SUPT20HL1Q3ZLR7 823 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 SPRYD7Q5W111 196 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 DZIP1Q86YF9 867 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 RPAP2Q8IXW5 612 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 RHPN1Q8TCX5 695 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 NSUN4Q96CB9 384 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 FAM163AQ96GL9 167 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 DDX4Q9NQI0 724 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 PIH1D3Q9NQM4 214 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 RNF186Q9NXI6 227 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 NDUFB9Q9Y6M9 179 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 MROH7-TTC4A0A0A0MT08 1334 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 ATRNL1Q5VV63 1379 aa10.49□□□□□ -0.73
HERPUD2-203ENST00000413517 PPP1R12BO60237 982 aaPredicted RBP10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 TRAK2O60296 914 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 UQCRFS1P1P0C7P4 283 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 BTDP43251 543 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 ZAP70P43403 619 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 TNNI2P48788 182 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 RRP1P56182 461 aaKnown RBP10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 RHBDL3P58872 404 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 SH3BP5LQ7L8J4 393 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 AACSQ86V21 672 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 ZGPATQ8N5A5 531 aaKnown RBP10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 ZNF512BQ96KM6 892 aaPredicted RBP10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 USP40Q9NVE5 1235 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 TMOD2Q9NZR1 351 aa10.48□□□□□ -0.73
HERPUD2-203ENST00000413517 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 GPR75-ASB3A0A0A6YYF3 556 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 DPYSL4O14531 572 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 TRPA1O75762 1119 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 IREB2P48200 963 aaKnown RBP10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 RGS3P49796 1198 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 VGLL4Q14135 290 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 CCDC158Q5M9N0 1113 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 SPTY2D1Q68D10 685 aaPredicted RBP10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 FAM151AQ8WW52 585 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 SLC10A4Q96EP9 437 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 BEGAINQ9BUH8 593 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 IDI2Q9BXS1 227 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 ANTXR1Q9H6X2 564 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 ELP3Q9H9T3 547 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 SNCAIPQ9Y6H5 919 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 ZSWIM8A7E2V4 1837 aa10.47□□□□□ -0.73
HERPUD2-203ENST00000413517 CA12O43570 354 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 INPP5BP32019 993 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 TM4SF4P48230 202 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms