RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 IFNAR1P17181 557 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 UBE4AQ14139 1066 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 RRP12Q5JTH9 1297 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 MIGA1Q8NAN2 632 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 MYRIPQ8NFW9 859 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 SLC26A6Q9BXS9 759 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 NID2Q14112 1375 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 WTAPQ15007 396 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 TIGD1Q96MW7 591 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 CCDC196A0A1B0GTZ2 297 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 KCNQ2O43526 872 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 PFKFB1P16118 471 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 BSDC1Q9NW68 430 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 ABCF2Q9UG63 623 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
TRAFD1-202ENST00000412615 RGL2O15211 777 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 MARCKSP29966 332 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 RCAN1P53805 252 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 RTN1Q16799 776 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 ERFEQ4G0M1 354 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 AOPEPQ8N6M6 819 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 RAI14Q9P0K7 980 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 MYH14Q7Z406 1995 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 LAMB2P55268 1798 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 PPARAQ07869 468 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 PTPAQ15257 358 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 IQSEC3Q9UPP2 1182 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 BCL9LQ86UU0 1499 aa13.28□□□□□ -0.28
TRAFD1-202ENST00000412615 A0A087WWV3 80 aa13.27□□□□□ -0.28
TRAFD1-202ENST00000412615 NEMFO60524 1076 aa13.27□□□□□ -0.28
TRAFD1-202ENST00000412615 SYKP43405 635 aa13.27□□□□□ -0.28
TRAFD1-202ENST00000412615 GYG1P46976 350 aa13.27□□□□□ -0.28
TRAFD1-202ENST00000412615 LRMPQ12912 555 aa13.27□□□□□ -0.28
TRAFD1-202ENST00000412615 MAP3K14Q99558 947 aa13.27□□□□□ -0.28
TRAFD1-202ENST00000412615 ANAPC4Q9UJX5 808 aa13.27□□□□□ -0.28
TRAFD1-202ENST00000412615 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-202ENST00000412615 NLRP12P59046 1061 aa13.27□□□□□ -0.29
TRAFD1-202ENST00000412615 ESR2Q92731 530 aa13.27□□□□□ -0.29
TRAFD1-202ENST00000412615 ZKSCAN3Q9BRR0 538 aa13.27□□□□□ -0.29
TRAFD1-202ENST00000412615 UBAC1Q9BSL1 405 aa13.27□□□□□ -0.29
TRAFD1-202ENST00000412615 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
TRAFD1-202ENST00000412615 HPSEQ9Y251 543 aa13.27□□□□□ -0.29
TRAFD1-202ENST00000412615 FAM237AA0A1B0GTK4 181 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 CUTAO60888 179 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 DPCR1Q3MIW9 517 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 SLC10A5Q5PT55 438 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 CACTINQ8WUQ7 758 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 FBXW7Q969H0 707 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 MINPP1Q9UNW1 487 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 DEXIO95424 95 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 TPM4P67936 248 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 PPP2R5BQ15173 497 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 CCDC144BQ3MJ40 725 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 ADGRA1Q86SQ6 560 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 NOSTRINQ8IVI9 506 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 SMTNL1A8MU46 457 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 MMP1P03956 469 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 SHC4Q6S5L8 630 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 LRRC8AQ8IWT6 810 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 ZNF654Q8IZM8 581 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 CRACR2BQ8N4Y2 399 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 FANCBQ8NB91 859 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 SDR42E1Q8WUS8 393 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
TRAFD1-202ENST00000412615 GTF2F1P35269 517 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 RBM10P98175 930 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 RIOK1Q9BRS2 568 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 FOXP1Q9H334 677 aaPredicted RBP13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 SEMA3EO15041 775 aa13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms