RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 SH3RF3Q8TEJ3 882 aaPredicted RBP13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 BRF1Q92994 677 aa13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 LARP6Q9BRS8 491 aaKnown RBP13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 NBPF3Q9H094 633 aa13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 DCP1AQ9NPI6 582 aaPredicted RBP13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 ANAPC4Q9UJX5 808 aa13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 NEDD4P46934 1319 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 B4E1Z4 1266 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 LARGE1O95461 756 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 PCP11498 1178 aaKnown RBP13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 SBK1Q52WX2 424 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 ARHGAP27Q6ZUM4 889 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 NIM1KQ8IY84 436 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 TEX11Q8IYF3 940 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 TEKT1Q969V4 418 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 TPCN1Q9ULQ1 816 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 DAGLAQ9Y4D2 1042 aa13.7□□□□□ -0.22
SNRNP35-202ENST00000412157 MYO3BQ8WXR4 1341 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 USP17L21D6R901 530 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 DDIT3P35638 169 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 NUCB2P80303 420 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 COL9A3Q14050 684 aaPredicted RBP13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 ME3Q16798 604 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 CTR9Q6PD62 1173 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 FBXL16Q8N461 479 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 MXD3Q9BW11 206 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 AGXT2Q9BYV1 514 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 ZNF277Q9NRM2 450 aaPredicted RBP13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 SMC3Q9UQE7 1217 aa13.69□□□□□ -0.22
SNRNP35-202ENST00000412157 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 TOMM70O94826 608 aa13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 SCNN1DP51172 638 aa13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 HDLBPQ00341 1268 aaKnown RBP13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 TGFBRAP1Q8WUH2 860 aa13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 ESR2Q92731 530 aa13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
SNRNP35-202ENST00000412157 ERICH2A1L162 156 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 KDM4AO75164 1064 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 POLR3DP05423 398 aaPredicted RBP13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 CRKP46108 304 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 NT5C2P49902 561 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 ANTXR2P58335 489 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 PDE4BQ07343 736 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 STK3Q13188 491 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 CYB5R4Q7L1T6 521 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 KIAA0825Q8IV33 1275 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 MTA3Q9BTC8 594 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 NMRK2Q9NPI5 230 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 KCNQ5Q9NR82 932 aa13.67□□□□□ -0.22
SNRNP35-202ENST00000412157 MYH6P13533 1939 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 COL4A5P29400 1685 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 CYP2D7A0A087X1C5 515 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 YDJCA8MPS7 323 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 SH2B2O14492 632 aaPredicted RBP13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 RBM5P52756 815 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 RHBDL3P58872 404 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 TMEM67Q5HYA8 995 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 GTF3C6Q969F1 213 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 ZNF274Q96GC6 653 aaPredicted RBP13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 MRIQ9BWK5 157 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 HDAC9Q9UKV0 1011 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 ZNRF3Q9ULT6 936 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
SNRNP35-202ENST00000412157 FLT1P17948 1338 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 LTBP3Q9NS15 1303 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 IFIT3O14879 490 aaKnown RBP13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 PFKFB2O60825 505 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 CYP2D6P10635 497 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 C12orf60Q5U649 245 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 RSBN1LQ6PCB5 846 aaPredicted RBP13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 NFXL1Q6ZNB6 911 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 ZDHHC15Q96MV8 337 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 UBAC1Q9BSL1 405 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 ZNF287Q9HBT7 754 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms