RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 THAP12O43422 761 aa8.21□□□□□ -1.09
PTPN3-203ENST00000412145 LMNB2Q03252 620 aa8.21□□□□□ -1.09
PTPN3-203ENST00000412145 ZNF804AQ7Z570 1209 aa8.21□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC61Q9Y6R9 512 aa8.21□□□□□ -1.09
PTPN3-203ENST00000412145 GOLGA5Q8TBA6 731 aa8.21□□□□□ -1.09
PTPN3-203ENST00000412145 TACO1Q9BSH4 297 aaKnown RBP8.21□□□□□ -1.09
PTPN3-203ENST00000412145 PTCD1O75127 700 aaKnown RBP8.21□□□□□ -1.1
PTPN3-203ENST00000412145 ALDH1L1O75891 902 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 CCDC93Q567U6 631 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 KRT28Q7Z3Y7 464 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 TSR2Q969E8 191 aaKnown RBP8.21□□□□□ -1.1
PTPN3-203ENST00000412145 ARHGAP6O43182 974 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 N4BP1O75113 896 aaKnown RBP8.21□□□□□ -1.1
PTPN3-203ENST00000412145 TTC4O95801 387 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 F13A1P00488 732 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 TYRO3Q06418 890 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 SLC9C1Q4G0N8 1177 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 SEPT8Q92599 483 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 FAM81BQ96LP2 452 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 TBC1D2Q9BYX2 928 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 CTTNBP2NLQ9P2B4 639 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 PDCD7Q8N8D1 485 aaKnown RBP8.21□□□□□ -1.1
PTPN3-203ENST00000412145 ALG1Q9BT22 464 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 TRIM4Q9C037 500 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 TROQ12816 1431 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-203ENST00000412145 SPOPO43791 374 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 ZNF189O75820 626 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-203ENST00000412145 WHAMMQ8TF30 809 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 SPZ1Q9BXG8 430 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 FAF1Q9UNN5 650 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-203ENST00000412145 SATB2Q9UPW6 733 aa8.21□□□□□ -1.1
PTPN3-203ENST00000412145 NCOA1Q15788 1441 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 TTI1O43156 1089 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 ATP8B1O43520 1251 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 AOX1Q06278 1338 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 DTHD1Q6ZMT9 781 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 SV2BQ7L1I2 683 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 MICU3Q86XE3 530 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 NLRP7Q8WX94 980 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 RLBP1P12271 317 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 SSFA2P28290 1259 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 RARSP54136 660 aaKnown RBP8.2□□□□□ -1.1
PTPN3-203ENST00000412145 NAPAP54920 295 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 NYXQ9GZU5 481 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 FAM160A1Q05DH4 1040 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 TRIM60Q495X7 471 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 FAM71BQ8TC56 605 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 IFT81Q8WYA0 676 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 RBSNQ9H1K0 784 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 ZHX1Q9UKY1 873 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-203ENST00000412145 GUCA1BQ9UMX6 200 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 CUL7Q14999 1698 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 LRRD1A4D1F6 860 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-203ENST00000412145 MCMDC2Q4G0Z9 681 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 TMCO5AQ8N6Q1 288 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 SECISBP2LQ93073 1101 aaKnown RBP8.2□□□□□ -1.1
PTPN3-203ENST00000412145 ZMYND15Q9H091 742 aa8.2□□□□□ -1.1
PTPN3-203ENST00000412145 HCLS1P14317 486 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-203ENST00000412145 PPP1R21Q6ZMI0 780 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 RASEFQ8IZ41 740 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 MLKLQ8NB16 471 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 IL1RAPL2Q9NP60 686 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 TRMT112Q9UI30 125 aaKnown RBP8.19□□□□□ -1.1
PTPN3-203ENST00000412145 PHF8Q9UPP1 1060 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 EXOC5O00471 708 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 PYGLP06737 847 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
PTPN3-203ENST00000412145 CCHCR1Q8TD31 782 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 LCMT1Q9UIC8 334 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 EXOC6BQ9Y2D4 811 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 MAP3K1Q13233 1512 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 IL15P40933 162 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-203ENST00000412145 CALR3Q96L12 384 aaKnown RBP8.19□□□□□ -1.1
PTPN3-203ENST00000412145 FNBP1Q96RU3 617 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 BOLA2Q9H3K6 86 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 IFT122Q9HBG6 1241 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 ZNF219Q9P2Y4 722 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-203ENST00000412145 KRT10P13645 584 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 ZNF569Q5MCW4 686 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 SMC5Q8IY18 1101 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 EFCAB14O75071 495 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 KRBA2Q6ZNG9 492 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 JRKLQ9Y4A0 524 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 DAAM1Q9Y4D1 1078 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 ZMYM3Q14202 1370 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 MAST3O60307 1309 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 BIN1O00499 593 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 SEPT2Q15019 361 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 RPS6KA2Q15349 733 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 MPRIPQ6WCQ1 1025 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 TBC1D9Q6ZT07 1266 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 OGFOD1Q8N543 542 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 FBXO41Q8TF61 875 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 ARHGAP42A6NI28 874 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 C11orf95C9JLR9 678 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-203ENST00000412145 TRIM58Q8NG06 486 aa8.19□□□□□ -1.1
PTPN3-203ENST00000412145 SCINQ9Y6U3 715 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms