RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 RGS3P49796 1198 aa9.93□□□□□ -0.82
RPE-204ENST00000411934 DEFB115Q30KQ5 88 aa9.93□□□□□ -0.82
RPE-204ENST00000411934 EVI5LQ96CN4 794 aa9.93□□□□□ -0.82
RPE-204ENST00000411934 RIOK1Q9BRS2 568 aaKnown RBP9.93□□□□□ -0.82
RPE-204ENST00000411934 AATFQ9NY61 560 aaKnown RBP eCLIP9.93□□□□□ -0.82
RPE-204ENST00000411934 FAM198AQ9UFP1 575 aa9.93□□□□□ -0.82
RPE-204ENST00000411934 ABT1Q9ULW3 272 aaKnown RBP9.93□□□□□ -0.82
RPE-204ENST00000411934 OTOFQ9HC10 1997 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 FLT1P17948 1338 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 ZNF532Q9HCE3 1301 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 TBC1D12O60347 775 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 HUNKP57058 714 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 MAP3K10Q02779 954 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 NFIAQ12857 509 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 LDLRAD1Q5T700 205 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 ADGRA1Q86SQ6 560 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 PLEKHM2Q8IWE5 1019 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 TEX11Q8IYF3 940 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 ANKRD13AQ8IZ07 590 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 DNAJC5GQ8N7S2 189 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
RPE-204ENST00000411934 APPBP2Q92624 585 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 CCDC102AQ96A19 550 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 CRNKL1Q9BZJ0 848 aaKnown RBP9.92□□□□□ -0.82
RPE-204ENST00000411934 TMEM39BQ9GZU3 492 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 OSBPL5Q9H0X9 879 aaPredicted RBP9.92□□□□□ -0.82
RPE-204ENST00000411934 ZNF408Q9H9D4 720 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 HERC5Q9UII4 1024 aaKnown RBP9.92□□□□□ -0.82
RPE-204ENST00000411934 NDUFB9Q9Y6M9 179 aa9.92□□□□□ -0.82
RPE-204ENST00000411934 NAV1Q8NEY1 1877 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 MAGEB6P1A0A0J9YX57 407 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 KCNA4P22459 653 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 CACNB3P54284 484 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 FMR1Q06787 632 aaKnown RBP eCLIP9.91□□□□□ -0.82
RPE-204ENST00000411934 NOGQ13253 232 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 NBPF12Q5TAG4 269 aaPredicted RBP9.91□□□□□ -0.82
RPE-204ENST00000411934 RGMBQ6NW40 437 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 JMYQ8N9B5 988 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 CSRNP1Q96S65 589 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 ZNF341Q9BYN7 854 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 DDX4Q9NQI0 724 aaKnown RBP9.91□□□□□ -0.82
RPE-204ENST00000411934 ATP8A2Q9NTI2 1148 aa9.91□□□□□ -0.82
RPE-204ENST00000411934 AK9Q5TCS8 1911 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 HIP1O00291 1037 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 RNF113AO15541 343 aaKnown RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 HLA-DOAP06340 250 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 SLC10A3P09131 477 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 ZBTB48P10074 688 aaPredicted RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 PRKAR2AP13861 404 aaKnown RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 GNAT2P19087 354 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 MAP2K2P36507 400 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 NOL9Q5SY16 702 aaKnown RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 TSHZ3Q63HK5 1081 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 B4GALNT3Q6L9W6 998 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 GIMAP6Q6P9H5 292 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 METTL16Q86W50 562 aaKnown RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.82
RPE-204ENST00000411934 SH3RF3Q8TEJ3 882 aaPredicted RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 AIDAQ96BJ3 306 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 EDC3Q96F86 508 aaKnown RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 FSD1Q9BTV5 496 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 EHD4Q9H223 541 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 GINM1Q9NU53 330 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 MKRN1Q9UHC7 482 aaKnown RBP9.9□□□□□ -0.82
RPE-204ENST00000411934 ZNF112Q9UJU3 913 aa9.9□□□□□ -0.82
RPE-204ENST00000411934 WDR33Q9C0J8 1336 aaKnown RBP9.89□□□□□ -0.83
RPE-204ENST00000411934 USP2O75604 605 aaPredicted RBP9.89□□□□□ -0.83
RPE-204ENST00000411934 USP5P45974 858 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 TCP10Q12799 353 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 PICALMQ13492 652 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
RPE-204ENST00000411934 PRAMEF18Q5VWM3 479 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 MIGA1Q8NAN2 632 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 CCDC136Q96JN2 1154 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 CAPNS2Q96L46 248 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 BCL11AQ9H165 835 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 PI4KBQ9UBF8 816 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 ANGEL1Q9UNK9 670 aaKnown RBP9.89□□□□□ -0.83
RPE-204ENST00000411934 CSADQ9Y600 493 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 MYH1P12882 1939 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 SIPA1L1O43166 1804 aa9.89□□□□□ -0.83
RPE-204ENST00000411934 DOCK1Q14185 1865 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 DDTLA6NHG4 134 aaPredicted RBP9.88□□□□□ -0.83
RPE-204ENST00000411934 FAM155AB1AL88 458 aaPredicted RBP9.88□□□□□ -0.83
RPE-204ENST00000411934 MBD4O95243 580 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 ZNF157P51786 506 aaPredicted RBP9.88□□□□□ -0.83
RPE-204ENST00000411934 DYNLL1P63167 89 aaKnown RBP9.88□□□□□ -0.83
RPE-204ENST00000411934 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 ZMYM1Q5SVZ6 1142 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 DLK2Q6UY11 383 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 TTC6Q86TZ1 520 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 RASAL3Q86YV0 1011 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 FOXP4Q8IVH2 680 aaPredicted RBP9.88□□□□□ -0.83
RPE-204ENST00000411934 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
RPE-204ENST00000411934 AMOTL1Q8IY63 956 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 TGFBRAP1Q8WUH2 860 aa9.88□□□□□ -0.83
RPE-204ENST00000411934 HELLSQ9NRZ9 838 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms