RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 IGF2BP3O00425 579 aaKnown RBP eCLIP2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 SLPIP03973 132 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 C6P13671 934 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 WEE1P30291 646 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 NKPD1Q17RQ9 610 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 SWI5Q1ZZU3 235 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 TTC6Q86TZ1 520 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 IRF2BP1Q8IU81 584 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 GPR152Q8TDT2 470 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 NAF1Q96HR8 494 aaKnown RBP2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 ZKSCAN3Q9BRR0 538 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 WDR18Q9BV38 432 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 LUC7LQ9NQ29 371 aaKnown RBP2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 CNTN3Q9P232 1028 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 PPP1R9AQ9ULJ8 1098 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 SYNGAP1Q96PV0 1343 aa2.91□□□□□ -1.94
RNU6-554P-201ENST00000410466 CYR61O00622 381 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 RNGTTO60942 597 aaKnown RBP2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 MAGEA10P43363 369 aaPredicted RBP2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 ZAP70P43403 619 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 DPYDQ12882 1025 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 RTP5Q14D33 572 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 LARP1Q6PKG0 1096 aaKnown RBP2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 IL27Q8NEV9 243 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 BHLHE41Q9C0J9 482 aaPredicted RBP2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 SLC6A17Q9H1V8 727 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 ATP13A1Q9HD20 1204 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 GCM1Q9NP62 436 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 SLAMF8Q9P0V8 285 aa2.9□□□□□ -1.95
RNU6-554P-201ENST00000410466 TMPRSS2O15393 492 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 ADAM17P78536 824 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 PCDH1Q08174 1060 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 ZFPM1Q8IX07 1006 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 C1orf127Q8N9H9 656 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 DDX54Q8TDD1 881 aaKnown RBP2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 DACT3Q96B18 629 aaPredicted RBP2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 SIGLEC10Q96LC7 697 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 FANCD2OSQ96PS1 177 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 SGPP1Q9BX95 441 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 RNF32Q9H0A6 362 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 PCOLCE2Q9UKZ9 415 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 IRAK3Q9Y616 596 aa2.89□□□□□ -1.95
RNU6-554P-201ENST00000410466 CILPO75339 1184 aa2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 ECEL1O95672 775 aa2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 HCLS1P14317 486 aaPredicted RBP2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 TACR2P21452 398 aa2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 PANK1Q8TE04 598 aa2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 PMEPA1Q969W9 287 aa2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 CLEC4MQ9H2X3 399 aaPredicted RBP2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 SSU72Q9NP77 194 aaKnown RBP2.88□□□□□ -1.95
RNU6-554P-201ENST00000410466 PRICKLE3O43900 615 aaPredicted RBP2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 HPXP02790 462 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 EDN3P14138 238 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 HK2P52789 917 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 ERVFC1P60507 584 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 ID3Q02535 119 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 HNRNPA0Q13151 305 aaKnown RBP2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 TTLL4Q14679 1199 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 VMACQ2NL98 169 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 FAM26DQ5JW98 314 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 C16orf46Q6P387 395 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 XKR5Q6UX68 686 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 USP51Q70EK9 711 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 FAM214BQ7L5A3 538 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 WWC1Q8IX03 1113 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 HSPA12BQ96MM6 686 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 UCN2Q96RP3 112 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 TRIM56Q9BRZ2 755 aaKnown RBP2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 FOXQ1Q9C009 403 aa2.87□□□□□ -1.95
RNU6-554P-201ENST00000410466 FAM155AB1AL88 458 aaPredicted RBP2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 C1QTNF3-AMACRE9PGA6 284 aa2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 SLFN14P0C7P3 912 aa2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 HNRNPUQ00839 825 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 UBXN11Q5T124 520 aa2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 SMPD4Q9NXE4 827 aa2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 TMEM59LQ9UK28 342 aa2.86□□□□□ -1.95
RNU6-554P-201ENST00000410466 DNAJC25-GNG10A0A024R161 153 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 METTL12A8MUP2 240 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 H3BS24 57 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 TRHRP34981 398 aaPredicted RBP2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 PDE6BP35913 854 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 PTK7Q13308 1070 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 FKBP5Q13451 457 aaPredicted RBP2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 ZNF423Q2M1K9 1284 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 ANKMY2Q8IV38 441 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 NUDT16Q96DE0 195 aaKnown RBP2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 SAP130Q9H0E3 1048 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 DNAJC25Q9H1X3 360 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 ZNF552Q9H707 407 aaPredicted RBP2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 PRDM5Q9NQX1 630 aaPredicted RBP2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 DISC1Q9NRI5 854 aa2.85□□□□□ -1.95
RNU6-554P-201ENST00000410466 TNFRSF10BO14763 440 aa2.84□□□□□ -1.95
RNU6-554P-201ENST00000410466 RPLP1P05386 114 aaKnown RBP2.84□□□□□ -1.95
RNU6-554P-201ENST00000410466 LIG1P18858 919 aa2.84□□□□□ -1.95
RNU6-554P-201ENST00000410466 ACVRL1P37023 503 aa2.84□□□□□ -1.95
RNU6-554P-201ENST00000410466 ATXN1P54253 815 aaKnown RBP2.84□□□□□ -1.95
RNU6-554P-201ENST00000410466 RALGPS1Q5JS13 557 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms