RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 SLC10A4Q96EP9 437 aa23.14■■□□□ 1.29
PPM1B-207ENST00000409486 HHIPL1Q96JK4 782 aa23.14■■□□□ 1.29
PPM1B-207ENST00000409486 WRNIP1Q96S55 665 aa23.14■■□□□ 1.29
PPM1B-207ENST00000409486 IDI2Q9BXS1 227 aa23.14■■□□□ 1.29
PPM1B-207ENST00000409486 MAGEB6P1A0A0J9YX57 407 aa23.13■■□□□ 1.29
PPM1B-207ENST00000409486 DDTLA6NHG4 134 aaPredicted RBP23.13■■□□□ 1.29
PPM1B-207ENST00000409486 FAM155AB1AL88 458 aaPredicted RBP23.13■■□□□ 1.29
PPM1B-207ENST00000409486 SLC10A3P09131 477 aa23.13■■□□□ 1.29
PPM1B-207ENST00000409486 USP5P45974 858 aa23.13■■□□□ 1.29
PPM1B-207ENST00000409486 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.13■■□□□ 1.29
PPM1B-207ENST00000409486 RFX7Q2KHR2 1363 aa23.12■■□□□ 1.29
PPM1B-207ENST00000409486 FAM196BA6NMK8 535 aa23.12■■□□□ 1.29
PPM1B-207ENST00000409486 ERC2O15083 957 aa23.12■■□□□ 1.29
PPM1B-207ENST00000409486 ENTPD3O75355 529 aa23.12■■□□□ 1.29
PPM1B-207ENST00000409486 PLCG2P16885 1265 aa23.12■■□□□ 1.29
PPM1B-207ENST00000409486 KIF23Q02241 960 aaPredicted RBP23.12■■□□□ 1.29
PPM1B-207ENST00000409486 DCAF15Q66K64 600 aa23.12■■□□□ 1.29
PPM1B-207ENST00000409486 SH3BP5LQ7L8J4 393 aa23.12■■□□□ 1.29
PPM1B-207ENST00000409486 NOGQ13253 232 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 ZKSCAN4Q969J2 545 aaPredicted RBP23.11■■□□□ 1.29
PPM1B-207ENST00000409486 AIDAQ96BJ3 306 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 RPAP1Q9BWH6 1393 aaPredicted RBP23.11■■□□□ 1.29
PPM1B-207ENST00000409486 TTC41PQ6P2S7 1318 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 LDLRAD1Q5T700 205 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 CHD1LQ86WJ1 897 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 ANKRD13AQ8IZ07 590 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 PI4K2BQ8TCG2 481 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 HOOK2Q96ED9 719 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 ZNF341Q9BYN7 854 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 OSBPL5Q9H0X9 879 aaPredicted RBP23.11■■□□□ 1.29
PPM1B-207ENST00000409486 TSKSQ9UJT2 592 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 CSADQ9Y600 493 aa23.11■■□□□ 1.29
PPM1B-207ENST00000409486 FLT1P17948 1338 aa23.1■■□□□ 1.29
PPM1B-207ENST00000409486 GLRX3O76003 335 aaKnown RBP23.1■■□□□ 1.29
PPM1B-207ENST00000409486 VGLL4Q14135 290 aa23.1■■□□□ 1.29
PPM1B-207ENST00000409486 CNKSR2Q8WXI2 1034 aa23.1■■□□□ 1.29
PPM1B-207ENST00000409486 BEGAINQ9BUH8 593 aa23.1■■□□□ 1.29
PPM1B-207ENST00000409486 ARMT1Q9H993 441 aa23.1■■□□□ 1.29
PPM1B-207ENST00000409486 INPP5BP32019 993 aa23.09■■□□□ 1.29
PPM1B-207ENST00000409486 ADD2P35612 726 aa23.09■■□□□ 1.29
PPM1B-207ENST00000409486 PPP4CP60510 307 aa23.09■■□□□ 1.29
PPM1B-207ENST00000409486 MAP3K9P80192 1104 aa23.09■■□□□ 1.29
PPM1B-207ENST00000409486 FSD1Q9BTV5 496 aa23.09■■□□□ 1.29
PPM1B-207ENST00000409486 FOCADQ5VW36 1801 aa23.09■■□□□ 1.29
PPM1B-207ENST00000409486 THSD7BQ9C0I4 1608 aa23.08■■□□□ 1.29
PPM1B-207ENST00000409486 TCRBV5S4A2TA0A5A2 114 aa23.08■■□□□ 1.29
PPM1B-207ENST00000409486 MBD4O95243 580 aa23.08■■□□□ 1.29
PPM1B-207ENST00000409486 NUCB1Q02818 461 aa23.08■■□□□ 1.29
PPM1B-207ENST00000409486 MAP3K11Q16584 847 aa23.08■■□□□ 1.29
PPM1B-207ENST00000409486 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.08■■□□□ 1.29
PPM1B-207ENST00000409486 LCORLQ8N3X6 602 aa23.08■■□□□ 1.29
PPM1B-207ENST00000409486 PALD1Q9ULE6 856 aa23.08■■□□□ 1.29
PPM1B-207ENST00000409486 PCNTO95613 3336 aa23.08■■□□□ 1.28
PPM1B-207ENST00000409486 MYH1P12882 1939 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 MAP2K2P36507 400 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 PDE1AP54750 535 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 MAP2K1Q02750 393 aaPredicted RBP23.07■■□□□ 1.28
PPM1B-207ENST00000409486 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.07■■□□□ 1.28
PPM1B-207ENST00000409486 OPTNQ96CV9 577 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 OTUD5Q96G74 571 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 WNK4Q96J92 1243 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 TRIM34Q9BYJ4 488 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 NAV1Q8NEY1 1877 aa23.07■■□□□ 1.28
PPM1B-207ENST00000409486 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
PPM1B-207ENST00000409486 ZSCAN25Q6NSZ9 544 aa23.06■■□□□ 1.28
PPM1B-207ENST00000409486 KBTBD3Q8NAB2 608 aa23.06■■□□□ 1.28
PPM1B-207ENST00000409486 SDR42E1Q8WUS8 393 aa23.06■■□□□ 1.28
PPM1B-207ENST00000409486 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.06■■□□□ 1.28
PPM1B-207ENST00000409486 SALL3Q9BXA9 1300 aa23.06■■□□□ 1.28
PPM1B-207ENST00000409486 FOXN1O15353 648 aa23.05■■□□□ 1.28
PPM1B-207ENST00000409486 NEFLP07196 543 aa23.05■■□□□ 1.28
PPM1B-207ENST00000409486 SPRYD7Q5W111 196 aa23.05■■□□□ 1.28
PPM1B-207ENST00000409486 RIOK1Q9BRS2 568 aaKnown RBP23.05■■□□□ 1.28
PPM1B-207ENST00000409486 CRNKL1Q9BZJ0 848 aaKnown RBP23.05■■□□□ 1.28
PPM1B-207ENST00000409486 TRIM6-TRIM34B2RNG4 842 aa23.05■■□□□ 1.28
PPM1B-207ENST00000409486 GJA5P36382 358 aa23.05■■□□□ 1.28
PPM1B-207ENST00000409486 CRACR2BQ8N4Y2 399 aaPredicted RBP23.05■■□□□ 1.28
PPM1B-207ENST00000409486 PRKAB2O43741 272 aa23.04■■□□□ 1.28
PPM1B-207ENST00000409486 RILPL2Q969X0 211 aa23.04■■□□□ 1.28
PPM1B-207ENST00000409486 PUS7LQ9H0K6 701 aaKnown RBP23.04■■□□□ 1.28
PPM1B-207ENST00000409486 WBP1LQ9NX94 342 aa23.04■■□□□ 1.28
PPM1B-207ENST00000409486 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.04■■□□□ 1.28
PPM1B-207ENST00000409486 SNCAIPQ9Y6H5 919 aa23.04■■□□□ 1.28
PPM1B-207ENST00000409486 RNF113AO15541 343 aaKnown RBP23.03■■□□□ 1.28
PPM1B-207ENST00000409486 ATRNL1Q5VV63 1379 aa23.02■■□□□ 1.28
PPM1B-207ENST00000409486 IGSF3O75054 1194 aa23.02■■□□□ 1.28
PPM1B-207ENST00000409486 POLR3DP05423 398 aaPredicted RBP23.02■■□□□ 1.28
PPM1B-207ENST00000409486 HLA-DOAP06340 250 aa23.02■■□□□ 1.28
PPM1B-207ENST00000409486 SIPA1L1O43166 1804 aa23.01■■□□□ 1.27
PPM1B-207ENST00000409486 UBE3CQ15386 1083 aa23.01■■□□□ 1.27
PPM1B-207ENST00000409486 CCDC84Q86UT8 332 aaPredicted RBP23.01■■□□□ 1.27
PPM1B-207ENST00000409486 PLEKHM2Q8IWE5 1019 aa23.01■■□□□ 1.27
PPM1B-207ENST00000409486 MCM9Q9NXL9 1143 aa23.01■■□□□ 1.27
PPM1B-207ENST00000409486 STAP2Q9UGK3 403 aa23.01■■□□□ 1.27
PPM1B-207ENST00000409486 SLC4A4Q9Y6R1 1079 aa23.01■■□□□ 1.27
PPM1B-207ENST00000409486 BAZ2AQ9UIF9 1905 aaKnown RBP23.01■■□□□ 1.27
PPM1B-207ENST00000409486 NPM3O75607 178 aaKnown RBP23■■□□□ 1.27
PPM1B-207ENST00000409486 TRPA1O75762 1119 aa23■■□□□ 1.27
PPM1B-207ENST00000409486 CERS3Q8IU89 383 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms