RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 LLPHQ9BRT6 129 aaKnown RBP28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 EXOC7Q9UPT5 735 aa28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 NEURL1BA8MQ27 555 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 ATP2A1O14983 1001 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 PLCB3Q01970 1234 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 CPXCR1Q8N123 301 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 GPR162Q16538 588 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 TEKT1Q969V4 418 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 A0A1W2PRG0 241 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 GTF2IP78347 998 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 IQCGQ9H095 443 aaKnown RBP28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 AZI2Q9H6S1 392 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 USP40Q9NVE5 1235 aa28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 TRPC5Q9UL62 973 aaPredicted RBP28.18■■■□□ 2.1
SPIRE1-202ENST00000409402 TRAF5O00463 557 aa28.17■■■□□ 2.1
SPIRE1-202ENST00000409402 ARHGEF35A5YM69 484 aa28.17■■■□□ 2.1
SPIRE1-202ENST00000409402 CPA1P15085 419 aa28.17■■■□□ 2.1
SPIRE1-202ENST00000409402 PLCD3Q8N3E9 789 aa28.17■■■□□ 2.1
SPIRE1-202ENST00000409402 CCDC77Q9BR77 488 aa28.17■■■□□ 2.1
SPIRE1-202ENST00000409402 CCDC186Q7Z3E2 898 aa28.17■■■□□ 2.1
SPIRE1-202ENST00000409402 KRT25Q7Z3Z0 450 aa28.17■■■□□ 2.1
SPIRE1-202ENST00000409402 FAM227BQ96M60 508 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 TTF2Q9UNY4 1162 aaKnown RBP28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 SLC8A3P57103 927 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 RAPGEF1Q13905 1077 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 C2CD5Q86YS7 1000 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 NSMFQ6X4W1 530 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 NONOQ15233 471 aaKnown RBP eCLIP28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 MFSD14BQ5SR56 506 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 CNNM4Q6P4Q7 775 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 ATP2B4P23634 1241 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 TXKP42681 527 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 AS3MTQ9HBK9 375 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 CSADQ9Y600 493 aa28.16■■■□□ 2.1
SPIRE1-202ENST00000409402 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.15■■■□□ 2.1
SPIRE1-202ENST00000409402 ARPP21Q9UBL0 812 aaPredicted RBP28.15■■■□□ 2.1
SPIRE1-202ENST00000409402 KIAA0232Q92628 1395 aa28.15■■■□□ 2.1
SPIRE1-202ENST00000409402 NCAPH2Q6IBW4 605 aa28.15■■■□□ 2.1
SPIRE1-202ENST00000409402 DPY19L2Q6NUT2 758 aa28.15■■■□□ 2.1
SPIRE1-202ENST00000409402 PDE4DQ08499 809 aa28.15■■■□□ 2.1
SPIRE1-202ENST00000409402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 TMEM94Q12767 1356 aa28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 POLR3GO15318 223 aaPredicted RBP28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 USH1GQ495M9 461 aa28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 SPECC1LQ69YQ0 1117 aa28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 CDAN1Q8IWY9 1227 aa28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 KIFAP3Q92845 792 aa28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 LUC7L2Q9Y383 392 aaKnown RBP28.14■■■□□ 2.1
SPIRE1-202ENST00000409402 QTRT2Q9H974 415 aaKnown RBP28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 ATP6V0A2Q9Y487 856 aa28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 PTPRTO14522 1441 aa28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 CALUO43852 315 aaPredicted RBP28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 KRT5P13647 590 aa28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 OTUD7AQ8TE49 926 aaPredicted RBP28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 SMCR8Q8TEV9 937 aaPredicted RBP28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 DNAI1Q9UI46 699 aa28.14■■■□□ 2.09
SPIRE1-202ENST00000409402 PNMA6EA0A0J9YXQ4 647 aa28.13■■■□□ 2.09
SPIRE1-202ENST00000409402 CTAGE9A4FU28 777 aa28.13■■■□□ 2.09
SPIRE1-202ENST00000409402 RNF187Q5TA31 235 aaPredicted RBP28.13■■■□□ 2.09
SPIRE1-202ENST00000409402 TTC38Q5R3I4 469 aa28.13■■■□□ 2.09
SPIRE1-202ENST00000409402 GIGYF1O75420 1035 aaPredicted RBP28.13■■■□□ 2.09
SPIRE1-202ENST00000409402 ANO1Q5XXA6 986 aa28.13■■■□□ 2.09
SPIRE1-202ENST00000409402 STX10O60499 249 aa28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 ARL1P40616 181 aaPredicted RBP28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 SNX14Q9Y5W7 946 aa28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 TFAP4Q01664 338 aa28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 TRIM6Q9C030 488 aaPredicted RBP28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 A0A1B0GVL5 298 aa28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 TRPC3Q13507 836 aa28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 DIS3L2Q8IYB7 885 aaKnown RBP28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 FAM160A1Q05DH4 1040 aa28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 RNF216Q9NWF9 866 aaPredicted RBP28.12■■■□□ 2.09
SPIRE1-202ENST00000409402 DDX39AO00148 427 aaKnown RBP28.11■■■□□ 2.09
SPIRE1-202ENST00000409402 SGSM2O43147 1006 aa28.11■■■□□ 2.09
SPIRE1-202ENST00000409402 CNKSR1Q969H4 720 aa28.11■■■□□ 2.09
SPIRE1-202ENST00000409402 GINS2Q9Y248 185 aa28.11■■■□□ 2.09
SPIRE1-202ENST00000409402 CFBP00751 764 aa28.11■■■□□ 2.09
SPIRE1-202ENST00000409402 CTNND2Q9UQB3 1225 aa28.11■■■□□ 2.09
SPIRE1-202ENST00000409402 TUBB4AP04350 444 aa28.1■■■□□ 2.09
SPIRE1-202ENST00000409402 DNM2P50570 870 aa28.1■■■□□ 2.09
SPIRE1-202ENST00000409402 NLGN1Q8N2Q7 840 aa28.1■■■□□ 2.09
SPIRE1-202ENST00000409402 ZBTB38Q8NAP3 1195 aaPredicted RBP28.1■■■□□ 2.09
SPIRE1-202ENST00000409402 KDRP35968 1356 aa28.1■■■□□ 2.09
SPIRE1-202ENST00000409402 NOC4LQ9BVI4 516 aaKnown RBP28.1■■■□□ 2.09
SPIRE1-202ENST00000409402 NCOA5Q9HCD5 579 aaKnown RBP28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 SLC5A4Q9NY91 659 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 ERBB4Q15303 1308 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 CHURC1Q8WUH1 139 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 MAK16Q9BXY0 300 aaKnown RBP28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 ATP5JP18859 108 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 LRWD1Q9UFC0 647 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 M0QZ92 97 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 MYL5Q02045 173 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 IFNKQ9P0W0 207 aa28.09■■■□□ 2.09
SPIRE1-202ENST00000409402 NPHP4O75161 1426 aaPredicted RBP28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 PPARAQ07869 468 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 ZNF772Q68DY9 489 aaPredicted RBP28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 ARHGAP27Q6ZUM4 889 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 KIFC2Q96AC6 838 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 NDUFB9Q9Y6M9 179 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms