RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CYP2D6P10635 497 aa16.89■□□□□ 0.29
CHRNA1-204ENST00000409323 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
CHRNA1-204ENST00000409323 DCP1AQ9NPI6 582 aaPredicted RBP16.89■□□□□ 0.29
CHRNA1-204ENST00000409323 PALD1Q9ULE6 856 aa16.89■□□□□ 0.29
CHRNA1-204ENST00000409323 CNTNAP1P78357 1384 aa16.88■□□□□ 0.29
CHRNA1-204ENST00000409323 PATL2C9JE40 543 aaKnown RBP16.88■□□□□ 0.29
CHRNA1-204ENST00000409323 ADM5C9JUS6 153 aa16.88■□□□□ 0.29
CHRNA1-204ENST00000409323 MAP1SQ66K74 1059 aaPredicted RBP16.88■□□□□ 0.29
CHRNA1-204ENST00000409323 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
CHRNA1-204ENST00000409323 LSG1Q9H089 658 aaKnown RBP16.88■□□□□ 0.29
CHRNA1-204ENST00000409323 TDO2P48775 406 aa16.87■□□□□ 0.29
CHRNA1-204ENST00000409323 MMP14P50281 582 aa16.87■□□□□ 0.29
CHRNA1-204ENST00000409323 TMED8Q6PL24 325 aaPredicted RBP16.87■□□□□ 0.29
CHRNA1-204ENST00000409323 TICAM2Q86XR7 235 aa16.87■□□□□ 0.29
CHRNA1-204ENST00000409323 ZSCAN29Q8IWY8 852 aaPredicted RBP16.87■□□□□ 0.29
CHRNA1-204ENST00000409323 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
CHRNA1-204ENST00000409323 MCM9Q9NXL9 1143 aa16.87■□□□□ 0.29
CHRNA1-204ENST00000409323 DDTLA6NHG4 134 aaPredicted RBP16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 HAND2P61296 217 aa16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 RASA3Q14644 834 aa16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 PNMA8AQ86V59 439 aaPredicted RBP16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 IDI2Q9BXS1 227 aa16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 GLIS2Q9BZE0 524 aaPredicted RBP16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 DDX60LQ5H9U9 1706 aaKnown RBP16.86■□□□□ 0.29
CHRNA1-204ENST00000409323 MINDY4BA8MYZ0 360 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 USP17L21D6R901 530 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 FGAP02671 866 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 GNAT2P19087 354 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 USP48Q86UV5 1035 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 NAPBQ9H115 298 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 DEFB129Q9H1M3 183 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 MKRN1Q9UHC7 482 aaKnown RBP16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 PLCD1P51178 756 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 CTR9Q6PD62 1173 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 KRT26Q7Z3Y9 468 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 FZD1Q9UP38 647 aa16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 RBM8AQ9Y5S9 174 aaKnown RBP16.85■□□□□ 0.29
CHRNA1-204ENST00000409323 TRAF5O00463 557 aa16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 KIF3CO14782 793 aa16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 CERS3Q8IU89 383 aa16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 SULF1Q8IWU6 871 aa16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 ATP8A2Q9NTI2 1148 aa16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 TAF6LQ9Y6J9 622 aa16.84■□□□□ 0.29
CHRNA1-204ENST00000409323 SIPA1L1O43166 1804 aa16.83■□□□□ 0.28
CHRNA1-204ENST00000409323 CTDSPL2Q05D32 466 aa16.83■□□□□ 0.28
CHRNA1-204ENST00000409323 DYNLL2Q96FJ2 89 aa16.83■□□□□ 0.28
CHRNA1-204ENST00000409323 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
CHRNA1-204ENST00000409323 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
CHRNA1-204ENST00000409323 INCENPQ9NQS7 918 aa16.83■□□□□ 0.28
CHRNA1-204ENST00000409323 LAMB1P07942 1786 aa16.83■□□□□ 0.28
CHRNA1-204ENST00000409323 ENTPD3O75355 529 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 REC8O95072 547 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 TNNI2P48788 182 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 TNFAIP1Q13829 316 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 PRKG1Q13976 671 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 NBPF12Q5TAG4 269 aaPredicted RBP16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 MIGA2Q7L4E1 593 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 LDHDQ86WU2 507 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 FAM151AQ8WW52 585 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 BACH2Q9BYV9 841 aa16.82■□□□□ 0.28
CHRNA1-204ENST00000409323 SLC44A5Q8NCS7 719 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 TEPSINQ96N21 525 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 USP26Q9BXU7 913 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 TSHZ2Q9NRE2 1034 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 PGAP2Q9UHJ9 254 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 TACC3Q9Y6A5 838 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 PPARAQ07869 468 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 FKBP1CQ5VVH2 108 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 FAM83AQ86UY5 434 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 NBPF3Q9H094 633 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 ZNF408Q9H9D4 720 aa16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
CHRNA1-204ENST00000409323 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
CHRNA1-204ENST00000409323 TBC1D10CQ8IV04 446 aa16.8■□□□□ 0.28
CHRNA1-204ENST00000409323 ARPP21Q9UBL0 812 aaPredicted RBP16.8■□□□□ 0.28
CHRNA1-204ENST00000409323 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
CHRNA1-204ENST00000409323 RPAP1Q9BWH6 1393 aaPredicted RBP16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 PRDM1O75626 825 aa16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 CYP21A2P08686 494 aa16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 ALX1Q15699 326 aa16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 CDC37L1Q7L3B6 337 aa16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 CDCA5Q96FF9 252 aa16.79■□□□□ 0.28
CHRNA1-204ENST00000409323 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 SLC27A2O14975 620 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms