RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ADRA2BP18089 450 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 BCAMP50895 628 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 GRAPQ13588 217 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 TXNRD1Q16881 649 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 CCDC183Q5T5S1 534 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 GIGYF2Q6Y7W6 1299 aaKnown RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 DHX32Q7L7V1 743 aaKnown RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 GRAPLQ8TC17 118 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 FAM193BQ96PV7 902 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 BACH2Q9BYV9 841 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 GTPBP4Q9BZE4 634 aaKnown RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 MRPL11Q9Y3B7 192 aaKnown RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 ERVV-1B6SEH8 477 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 SEMA3EO15041 775 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 CCNT1O60563 726 aaKnown RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 PRDM1O75626 825 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 NCAPH2Q6IBW4 605 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 FNBP1Q96RU3 617 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 AATKQ6ZMQ8 1374 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 SYKP43405 635 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 ICA1Q05084 483 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 UBE4AQ14139 1066 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 IL17REQ8NFR9 667 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 KCNG4Q8TDN1 519 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 PSMD1Q99460 953 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 DDX19AQ9NUU7 478 aaKnown RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 NPC1L1Q9UHC9 1359 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 ARHGEF35A5YM69 484 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 ACTN2P35609 894 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 PPARAQ07869 468 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 WDR44Q5JSH3 913 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 CCDC129Q6ZRS4 1044 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 CSRNP1Q96S65 589 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 DCTPP1Q9H773 170 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 CEP83Q9Y592 693 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 KIF24Q5T7B8 1368 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 GCOM1H8Y6P7 765 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-203ENST00000409101 POLR2MP0CAP2 368 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 HOXD10P28358 340 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 TFAP4Q01664 338 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 STX1AQ16623 288 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 RSPH3Q86UC2 560 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 TCEANC2Q96MN5 208 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 MAP7D2Q96T17 732 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 PODXL2Q9NZ53 605 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 SWAP70Q9UH65 585 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 PNMA3Q9UL41 463 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 KIF1BO60333 1816 aa5.68□□□□□ -1.5
SCN3A-203ENST00000409101 MYCP01106 439 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 TRPC3Q13507 836 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 ALS2CR12Q96Q35 445 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 NACA2Q9H009 215 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 TFIP11Q9UBB9 837 aaKnown RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 TESPA1A2RU30 521 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 DEXIO95424 95 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 NOP2P46087 812 aaKnown RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 FAM47AQ5JRC9 791 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 SV2BQ7L1I2 683 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 OTUD6AQ7L8S5 288 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 CCDC65Q8IXS2 484 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 METTL13Q8N6R0 699 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 LRFN2Q9ULH4 789 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 CNPY2Q9Y2B0 182 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 FRMD4BQ9Y2L6 1034 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 ATP10DQ9P241 1426 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 SYNMO15061 1565 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 BIN1O00499 593 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 CRB1P82279 1406 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 TAX1BP1Q86VP1 789 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 SYNE4Q8N205 404 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 FAM200AQ8TCP9 573 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 CPLX3Q8WVH0 158 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 RNF34Q969K3 372 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 DHX58Q96C10 678 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 TSNARE1Q96NA8 513 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 GREM2Q9H772 168 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 GPBP1L1Q9HC44 474 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 BIRC3Q13489 604 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 IFI16Q16666 785 aaKnown RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 FAM160B1Q5W0V3 765 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 FILIP1Q7Z7B0 1213 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 RNF169Q8NCN4 708 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 GSTTP1A0A1W2PQM5 241 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 PSMA7O14818 248 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 IGHDP01880 384 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 UTP14CQ5TAP6 766 aaKnown RBP5.67□□□□□ -1.5
SCN3A-203ENST00000409101 KRT25Q7Z3Z0 450 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 MYO3BQ8WXR4 1341 aa5.67□□□□□ -1.5
SCN3A-203ENST00000409101 BICDL2A1A5D9 508 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 TMCO5BA8MYB1 307 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 SORBS3O60504 671 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 AXDND1Q5T1B0 1012 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 RUFY3Q7L099 469 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CCDC91Q7Z6B0 441 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 RGS22Q8NE09 1264 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CFAP65Q6ZU64 1925 aaKnown RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CARMIL3Q8ND23 1372 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 ADGRB3O60242 1522 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms