RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 FAM173BQ6P4H8 233 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 RAB11FIP4Q86YS3 637 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 STK11IPQ8N1F8 1099 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 CNBD1Q8NA66 436 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 NAPBQ9H115 298 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 DENND2AQ9ULE3 1009 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 DDX60Q8IY21 1712 aaKnown RBP4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 AKAP11Q9UKA4 1901 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 COL4A1P02462 1669 aa4.69□□□□□ -1.66
LRRTM4-201ENST00000409088 H3BQV1 296 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 MBD3O95983 291 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 PDIA3P30101 505 aaKnown RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 TM4SF1P30408 202 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 ZSCAN23Q3MJ62 389 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 MB21D2Q8IYB1 491 aaPredicted RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 IFNL3Q8IZI9 196 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 LCORLQ8N3X6 602 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 AGXT2Q9BYV1 514 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 GRPEL1Q9HAV7 217 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 INCENPQ9NQS7 918 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 LRP5O75197 1615 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 B4E1Z4 1266 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 HIBADHP31937 336 aaKnown RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 CHAF1AQ13111 956 aaPredicted RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 TBC1D10CQ8IV04 446 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 ZNF274Q96GC6 653 aaPredicted RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 PANK2Q9BZ23 570 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 ANKRD2Q9GZV1 360 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 TMEM63CQ9P1W3 806 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 JAG2Q9Y219 1238 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 SLC4A4Q9Y6R1 1079 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 NHSQ6T4R5 1651 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 TAF1P21675 1872 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 KLF18A0A0U1RQI7 1052 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 GSG1L2A8MUP6 293 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 SERPINB2P05120 415 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 GYS1P13807 737 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 TDO2P48775 406 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 MRE11P49959 708 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 ANTXR2P58335 489 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 CTDSPL2Q05D32 466 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 SLC27A3Q5K4L6 730 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 PRR5LQ6MZQ0 368 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 POTEEQ6S8J3 1075 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 SLC51AQ86UW1 340 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 HOMEZQ8IX15 550 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 NSUN7Q8NE18 718 aaKnown RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 NKX2-3Q8TAU0 364 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 NBPF3Q9H094 633 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 EPB41L4AQ9HCS5 686 aaPredicted RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 TOMM22Q9NS69 142 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 ANKIB1Q9P2G1 1089 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 TFIP11Q9UBB9 837 aaKnown RBP4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 ZNF804BA4D1E1 1349 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 ZNF831Q5JPB2 1677 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 CARMIL3Q8ND23 1372 aa4.68□□□□□ -1.66
LRRTM4-201ENST00000409088 PTPDC1A2A3K4 754 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 CTDNEP1O95476 244 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 PDIA4P13667 645 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 ALX1Q15699 326 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 TXNRD1Q16881 649 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 RRP12Q5JTH9 1297 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 CYB5R4Q7L1T6 521 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 FBXO33Q7Z6M2 555 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 ADGRA1Q86SQ6 560 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 TXNRD3Q86VQ6 643 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 SMARCC2Q8TAQ2 1214 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 SDR42E1Q8WUS8 393 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 NACAP1Q9BZK3 213 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 BCORQ6W2J9 1755 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 MAGEB6P1A0A0J9YX57 407 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 SYCE3A1L190 88 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 GOLGA8BA8MQT2 603 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 MINDY4BA8MYZ0 360 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 HMGN5P82970 282 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 GUCY1B3Q02153 619 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 GRAPQ13588 217 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 NAA16Q6N069 864 aaPredicted RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 GRAPLQ8TC17 118 aaPredicted RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 RPGRQ92834 1020 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 LLPHQ9BRT6 129 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 ISY1Q9ULR0 285 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 MYO5AQ9Y4I1 1855 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 CPLX1O14810 134 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 KDM4AO75164 1064 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 GNAT2P19087 354 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 RXRAP19793 462 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 ZNF445P59923 1031 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 DYNLL1P63167 89 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 RBM6P78332 1123 aaKnown RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 KRT85P78386 507 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 ST5P78524 1137 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 CSPP1Q1MSJ5 1256 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 FBXL16Q8N461 479 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 GPR101Q96P66 508 aaPredicted RBP4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 KIF3AQ9Y496 699 aa4.67□□□□□ -1.66
LRRTM4-201ENST00000409088 APBA3O96018 575 aa4.66□□□□□ -1.66
LRRTM4-201ENST00000409088 C4BP0C0L5 1744 aa4.66□□□□□ -1.66
LRRTM4-201ENST00000409088 NEDD4P46934 1319 aa4.66□□□□□ -1.66
LRRTM4-201ENST00000409088 EVCP57679 992 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms