RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RFX7Q2KHR2 1363 aa11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 GJA5P36382 358 aa11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 MCAMP43121 646 aa11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 CRHR2Q13324 411 aa11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 PANK1Q8TE04 598 aa11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 NSUN4Q96CB9 384 aaKnown RBP11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 ZNF112Q9UJU3 913 aa11.11□□□□□ -0.63
SNORD88A-201ENST00000408314 SP3Q02447 781 aa11.1□□□□□ -0.63
SNORD88A-201ENST00000408314 PDE3AQ14432 1141 aa11.1□□□□□ -0.63
SNORD88A-201ENST00000408314 KIF22Q14807 665 aa11.1□□□□□ -0.63
SNORD88A-201ENST00000408314 BRI3BPQ8WY22 251 aa11.1□□□□□ -0.63
SNORD88A-201ENST00000408314 ZKSCAN4Q969J2 545 aaPredicted RBP11.1□□□□□ -0.63
SNORD88A-201ENST00000408314 DBNDD2Q9BQY9 259 aa11.1□□□□□ -0.63
SNORD88A-201ENST00000408314 ATRNL1Q5VV63 1379 aa11.1□□□□□ -0.63
SNORD88A-201ENST00000408314 IRF6O14896 467 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 TBC1D12O60347 775 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 CTNND1O60716 968 aaKnown RBP11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 INPP5BP32019 993 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 RGS19P49795 217 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 PICALMQ13492 652 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 PI16Q6UXB8 463 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 CLASRPQ8N2M8 674 aaKnown RBP11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 KIF1BPQ96EK5 621 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 TBC1D2Q9BYX2 928 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 DBNLQ9UJU6 430 aaKnown RBP11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 KCNH4Q9UQ05 1017 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 TRIM17Q9Y577 477 aa11.09□□□□□ -0.63
SNORD88A-201ENST00000408314 CXCL11O14625 94 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 RAB11FIP3O75154 756 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 GNRH1P01148 92 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 RHBDL3P58872 404 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 MAP3K10Q02779 954 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 MAP3K12Q12852 859 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 TBC1D9Q6ZT07 1266 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 FASTKD5Q7L8L6 764 aaKnown RBP11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 AACSQ86V21 672 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 CNKSR2Q8WXI2 1034 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 PARK7Q99497 189 aaKnown RBP11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 PTPN18Q99952 460 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 EFCC1Q9HA90 598 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 EXOC6BQ9Y2D4 811 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 COG6Q9Y2V7 657 aa11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.08□□□□□ -0.64
SNORD88A-201ENST00000408314 TLR2O60603 784 aa11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 PPP4CP60510 307 aa11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 OTOP1Q7RTM1 612 aa11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 FAM43AQ8N2R8 423 aa11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 TRIM34Q9BYJ4 488 aa11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 OSBPL5Q9H0X9 879 aaPredicted RBP11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
SNORD88A-201ENST00000408314 DOCK1Q14185 1865 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 DDTLA6NHG4 134 aaPredicted RBP11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 BTBD19C9JJ37 291 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 IDH1O75874 414 aaKnown RBP11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 CYP2E1P05181 493 aaPredicted RBP11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 HLA-DOAP06340 250 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 ZAP70P43403 619 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 PRMT2P55345 433 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 RHPN1Q8TCX5 695 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 CD99L2Q8TCZ2 262 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 CCDC8Q9H0W5 538 aaPredicted RBP11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 DDX4Q9NQI0 724 aaKnown RBP11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 GINM1Q9NU53 330 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 AATFQ9NY61 560 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 PI4KBQ9UBF8 816 aa11.06□□□□□ -0.64
SNORD88A-201ENST00000408314 PHF20L1A8MW92 1017 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 PDHXO00330 501 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 PTPRAP18433 802 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 ZFPM1Q8IX07 1006 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 ZNF384Q8TF68 577 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 AS3MTQ9HBK9 375 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 TLR7Q9NYK1 1049 aaKnown RBP11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 SLC45A1Q9Y2W3 748 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 ZHX2Q9Y6X8 837 aa11.05□□□□□ -0.64
SNORD88A-201ENST00000408314 A0A0G2JLL6 359 aaPredicted RBP11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 CYP7A1P22680 504 aa11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 HOXD10P28358 340 aa11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms