RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 NEFLP07196 543 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 ZNF157P51786 506 aaPredicted RBP12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 FKBP1BP68106 108 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 SLC4A8Q2Y0W8 1093 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 RGMBQ6NW40 437 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 RASAL3Q86YV0 1011 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 MAPKAPK5Q8IW41 473 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 FAM151AQ8WW52 585 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
TSPAN9-202ENST00000407263 FLT1P17948 1338 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 PPP1R12BO60237 982 aaPredicted RBP12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 ENTPD3O75355 529 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 GLRX3O76003 335 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 ECE1P42892 770 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 NUCB1Q02818 461 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 MIGA2Q7L4E1 593 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 CLMNQ96JQ2 1002 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 CSRNP1Q96S65 589 aa12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.45□□□□□ -0.42
TSPAN9-202ENST00000407263 ATRNL1Q5VV63 1379 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 MAGEB6P1A0A0J9YX57 407 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 TCRBV5S4A2TA0A5A2 114 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 DDTLA6NHG4 134 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 FAM196BA6NMK8 535 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 MBD4O95243 580 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 SLC10A3P09131 477 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 PLCG2P16885 1265 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 ADD2P35612 726 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 IREB2P48200 963 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 PDE1AP54750 535 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 SH3BP5LQ7L8J4 393 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 LCORLQ8N3X6 602 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 WRNIP1Q96S55 665 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 FSD1Q9BTV5 496 aa12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 OSBPL5Q9H0X9 879 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-202ENST00000407263 FAM155AB1AL88 458 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 USP2O75604 605 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 USP5P45974 858 aa12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 DCAF15Q66K64 600 aa12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 KBTBD3Q8NAB2 608 aa12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 ZIC5Q96T25 663 aa12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 ARMT1Q9H993 441 aa12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 ELP3Q9H9T3 547 aa12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
TSPAN9-202ENST00000407263 IGSF3O75054 1194 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 PDE4AP27815 886 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 PPP4CP60510 307 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 VGLL4Q14135 290 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 MAP3K11Q16584 847 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 JMYQ8N9B5 988 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 SDR42E1Q8WUS8 393 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 HOOK2Q96ED9 719 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 ZNF341Q9BYN7 854 aa12.42□□□□□ -0.42
TSPAN9-202ENST00000407263 HSPA1AP0DMV8 641 aaKnown RBP12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 HSPA1BP0DMV9 641 aaKnown RBP12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 INPP5BP32019 993 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 LDLRAD1Q5T700 205 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 ZSCAN25Q6NSZ9 544 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 PLEKHM2Q8IWE5 1019 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 ANKRD13AQ8IZ07 590 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 WNK4Q96J92 1243 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 STAP2Q9UGK3 403 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 CSADQ9Y600 493 aa12.41□□□□□ -0.42
TSPAN9-202ENST00000407263 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 M0R2C6 588 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 KIF23Q02241 960 aaPredicted RBP12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 NOGQ13253 232 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 UBE3CQ15386 1083 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 ZKSCAN4Q969J2 545 aaPredicted RBP12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 CCDC102AQ96A19 550 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 AIDAQ96BJ3 306 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 PUS7LQ9H0K6 701 aaKnown RBP12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 PALD1Q9ULE6 856 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
TSPAN9-202ENST00000407263 MYH4Q9Y623 1939 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 RNF113AO15541 343 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 PRKAB2O43741 272 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 GJA5P36382 358 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 EVX2Q03828 476 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 SKAP1Q86WV1 359 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 CERS3Q8IU89 383 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 APPBP2Q92624 585 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms