RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-206	ENST00000403542	INTS13	Q9NVM9	706 aa		13.78	□□□□□ -0.2
RBM39-206	ENST00000403542	RIPOR2	Q9Y4F9	1068 aa		13.78	□□□□□ -0.2
RBM39-206	ENST00000403542		A0A0U1RQG5	324 aa	Predicted RBP	13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	FAM205C	A6NFA0	338 aa		13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	IRS4	O14654	1257 aa	Predicted RBP	13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	TOGARAM2	Q6ZUX3	1019 aa		13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	OXER1	Q8TDS5	423 aa		13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	STAM	Q92783	540 aa		13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	MAP3K14	Q99558	947 aa		13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	SERTAD1	Q9UHV2	236 aa		13.77	□□□□□ -0.2
RBM39-206	ENST00000403542	AFM	P43652	599 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	GNG11	P61952	73 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	MTF1	Q14872	753 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	DIS3L2	Q8IYB7	885 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	WDR24	Q96S15	920 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	LY9	Q9HBG7	655 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	SEC31B	Q9NQW1	1179 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	SAMSN1	Q9NSI8	373 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	NFE2L3	Q9Y4A8	694 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	PCDHB6	Q9Y5E3	794 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-206	ENST00000403542		A0A0U1RQJ8	604 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	TERF2	Q15554	542 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	KRBA2	Q6ZNG9	492 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	JMY	Q8N9B5	988 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	IGDCC4	Q8TDY8	1250 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	ATRIP	Q8WXE1	791 aa		13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM39-206	ENST00000403542	ANKRD18B	A2A2Z9	1011 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	KIF20A	O95235	890 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	SSRP1	Q08945	709 aa	Known RBP	13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	CCDC34	Q96HJ3	373 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	BPIFA3	Q9BQP9	254 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	HPSE	Q9Y251	543 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	NWD2	Q9ULI1	1742 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	MINDY4B	A8MYZ0	360 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	CDKL5	O76039	1030 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	IL2RB	P14784	551 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	TDO2	P48775	406 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	NTRK3	Q16288	839 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	TEX35	Q5T0J7	233 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	RESP18	Q5W5W9	173 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	TRIM65	Q6PJ69	517 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	PIGB	Q92521	554 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	ZCCHC17	Q9NP64	241 aa	Known RBP	13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	ATG3	Q9NT62	314 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	ABCC6	O95255	1503 aa		13.76	□□□□□ -0.21
RBM39-206	ENST00000403542	PSD	A5PKW4	1024 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	PRDM1	O75626	825 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	PCCA	P05165	728 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	TOB1	P50616	345 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	STRBP	Q96SI9	672 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	L2HGDH	Q9H9P8	463 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	CABP5	Q9NP86	173 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	LZTFL1	Q9NQ48	299 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	TUBE1	Q9UJT0	475 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	CPD	O75976	1380 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	ERVV-2	B6SEH9	535 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	IKBKB	O14920	756 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	HSPA2	P54652	639 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	SLC4A8	Q2Y0W8	1093 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	NLRP10	Q86W26	655 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	VSTM4	Q8IW00	320 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	REXO1L1P	Q8IX06	675 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	IFNL3	Q8IZI9	196 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	KRI1	Q8N9T8	703 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	PPP2R2C	Q9Y2T4	447 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	MYH15	Q9Y2K3	1946 aa		13.75	□□□□□ -0.21
RBM39-206	ENST00000403542	WTIP	A6NIX2	430 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	KIF2A	O00139	706 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	TFRC	P02786	760 aa	Known RBP	13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	CTSW	P56202	376 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	CCDC93	Q567U6	631 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	NOSTRIN	Q8IVI9	506 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	DHX58	Q96C10	678 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	MAN1B1	Q9UKM7	699 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	PDE8B	O95263	885 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	FBXL16	Q8N461	479 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	BAG1	Q99933	345 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	ZBTB1	Q9Y2K1	713 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	FHOD1	Q9Y613	1164 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	SPATA31A3	Q5VYP0	1347 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	WDR17	Q8IZU2	1322 aa		13.74	□□□□□ -0.21
RBM39-206	ENST00000403542	VWA3A	A6NCI4	1184 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	CSF1R	P07333	972 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	BCAM	P50895	628 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	RASGRF1	Q13972	1273 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	POSTN	Q15063	836 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	LCORL	Q8N3X6	602 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	SDR42E1	Q8WUS8	393 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	ABCF2	Q9UG63	623 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	RIC1	Q4ADV7	1423 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	TEX33	O43247	280 aa		13.73	□□□□□ -0.21
RBM39-206	ENST00000403542	PPP6R2	O75170	966 aa		13.73	□□□□□ -0.21

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