RNA–Protein interactions for RNA: ENST00000401644.6

SNED1-203, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-203ENST00000401644 PDE1AP54750 535 aa16.41■□□□□ 0.22
SNED1-203ENST00000401644 NOGQ13253 232 aa16.41■□□□□ 0.22
SNED1-203ENST00000401644 PRKG1Q13976 671 aa16.41■□□□□ 0.22
SNED1-203ENST00000401644 ADGRA1Q86SQ6 560 aa16.41■□□□□ 0.22
SNED1-203ENST00000401644 PI4K2BQ8TCG2 481 aa16.41■□□□□ 0.22
SNED1-203ENST00000401644 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
SNED1-203ENST00000401644 AIDAQ96BJ3 306 aa16.41■□□□□ 0.22
SNED1-203ENST00000401644 MYH7P12883 1935 aa16.41■□□□□ 0.22
SNED1-203ENST00000401644 ADD2P35612 726 aa16.4■□□□□ 0.22
SNED1-203ENST00000401644 PICALMQ13492 652 aa16.4■□□□□ 0.22
SNED1-203ENST00000401644 UBE3CQ15386 1083 aa16.4■□□□□ 0.22
SNED1-203ENST00000401644 LDLRAD1Q5T700 205 aa16.4■□□□□ 0.22
SNED1-203ENST00000401644 TSHZ3Q63HK5 1081 aa16.4■□□□□ 0.22
SNED1-203ENST00000401644 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
SNED1-203ENST00000401644 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
SNED1-203ENST00000401644 SH3RF3Q8TEJ3 882 aaPredicted RBP16.4■□□□□ 0.22
SNED1-203ENST00000401644 ZNF532Q9HCE3 1301 aa16.4■□□□□ 0.22
SNED1-203ENST00000401644 RFX7Q2KHR2 1363 aa16.39■□□□□ 0.21
SNED1-203ENST00000401644 MAGEB6P1A0A0J9YX57 407 aa16.39■□□□□ 0.21
SNED1-203ENST00000401644 TCRBV5S4A2TA0A5A2 114 aa16.39■□□□□ 0.21
SNED1-203ENST00000401644 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
SNED1-203ENST00000401644 ZIC5Q96T25 663 aa16.39■□□□□ 0.21
SNED1-203ENST00000401644 DDX4Q9NQI0 724 aaKnown RBP16.39■□□□□ 0.21
SNED1-203ENST00000401644 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
SNED1-203ENST00000401644 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
SNED1-203ENST00000401644 MAP3K9P80192 1104 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
SNED1-203ENST00000401644 CDAN1Q8IWY9 1227 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 ZFPM1Q8IX07 1006 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 ANKRD13AQ8IZ07 590 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 MIGA1Q8NAN2 632 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 TGFBRAP1Q8WUH2 860 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 SLC10A4Q96EP9 437 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 CSRNP1Q96S65 589 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 BEGAINQ9BUH8 593 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
SNED1-203ENST00000401644 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
SNED1-203ENST00000401644 SSC5DA1L4H1 1573 aa16.38■□□□□ 0.21
SNED1-203ENST00000401644 SLC10A3P09131 477 aa16.37■□□□□ 0.21
SNED1-203ENST00000401644 USP5P45974 858 aa16.37■□□□□ 0.21
SNED1-203ENST00000401644 TICAM2Q86XR7 235 aa16.37■□□□□ 0.21
SNED1-203ENST00000401644 CRNKL1Q9BZJ0 848 aaKnown RBP16.37■□□□□ 0.21
SNED1-203ENST00000401644 OSBPL3Q9H4L5 887 aa16.37■□□□□ 0.21
SNED1-203ENST00000401644 COL2A1P02458 1487 aaPredicted RBP16.36■□□□□ 0.21
SNED1-203ENST00000401644 CDK5RAP2Q96SN8 1893 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 RNF113AO15541 343 aaKnown RBP16.36■□□□□ 0.21
SNED1-203ENST00000401644 TBC1D12O60347 775 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
SNED1-203ENST00000401644 MAP3K10Q02779 954 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 PLEKHM2Q8IWE5 1019 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
SNED1-203ENST00000401644 EVI5LQ96CN4 794 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
SNED1-203ENST00000401644 FZD1Q9UP38 647 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 CSADQ9Y600 493 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 ATRNL1Q5VV63 1379 aa16.36■□□□□ 0.21
SNED1-203ENST00000401644 DDTLA6NHG4 134 aaPredicted RBP16.35■□□□□ 0.21
SNED1-203ENST00000401644 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 SH3BP5LQ7L8J4 393 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 RASAL3Q86YV0 1011 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNED1-203ENST00000401644 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 PI4KBQ9UBF8 816 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 ZNF112Q9UJU3 913 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 FOCADQ5VW36 1801 aa16.35■□□□□ 0.21
SNED1-203ENST00000401644 LBX1P52954 281 aa16.34■□□□□ 0.21
SNED1-203ENST00000401644 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
SNED1-203ENST00000401644 WRNIP1Q96S55 665 aa16.34■□□□□ 0.21
SNED1-203ENST00000401644 PRDM10Q9NQV6 1147 aa16.34■□□□□ 0.21
SNED1-203ENST00000401644 MYH1P12882 1939 aa16.34■□□□□ 0.21
SNED1-203ENST00000401644 FLT1P17948 1338 aa16.34■□□□□ 0.21
SNED1-203ENST00000401644 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
SNED1-203ENST00000401644 CA12O43570 354 aa16.33■□□□□ 0.2
SNED1-203ENST00000401644 HLA-DOAP06340 250 aa16.33■□□□□ 0.2
SNED1-203ENST00000401644 HSPA8P11142 646 aaKnown RBP16.33■□□□□ 0.2
SNED1-203ENST00000401644 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.33■□□□□ 0.2
SNED1-203ENST00000401644 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
SNED1-203ENST00000401644 APPBP2Q92624 585 aa16.33■□□□□ 0.2
SNED1-203ENST00000401644 HERC5Q9UII4 1024 aaKnown RBP16.33■□□□□ 0.2
SNED1-203ENST00000401644 MBD4O95243 580 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 ZBTB48P10074 688 aaPredicted RBP16.32■□□□□ 0.2
SNED1-203ENST00000401644 ERICH6BQ5W0A0 696 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 SPRYD7Q5W111 196 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 LCORLQ8N3X6 602 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 DDRGK1Q96HY6 314 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 CLMNQ96JQ2 1002 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 ARMT1Q9H993 441 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNED1-203ENST00000401644 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
SNED1-203ENST00000401644 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
SNED1-203ENST00000401644 CTNND1O60716 968 aaKnown RBP16.31■□□□□ 0.2
SNED1-203ENST00000401644 VGLL4Q14135 290 aa16.31■□□□□ 0.2
SNED1-203ENST00000401644 SLFNL1Q499Z3 407 aa16.31■□□□□ 0.2
SNED1-203ENST00000401644 METTL16Q86W50 562 aaKnown RBP16.31■□□□□ 0.2
SNED1-203ENST00000401644 WNK4Q96J92 1243 aa16.31■□□□□ 0.2
SNED1-203ENST00000401644 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
SNED1-203ENST00000401644 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms