RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 ABCC12Q96J65 1359 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 CCDC194A0A1B0GVG4 234 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 POTECB2RU33 542 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L10C9JJH3 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L12C9JPN9 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L21D6R901 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 CHL1O00533 1208 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 PAX3P23760 479 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 HOXA10P31260 410 aaPredicted RBP7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 SUSD4Q5VX71 490 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 PADI6Q6TGC4 694 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 KLHL23Q8NBE8 558 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
CLIP4-202ENST00000401605 ARPC5LQ9BPX5 153 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 TMEM106CQ9BVX2 250 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 PRKRIP1Q9H875 184 aaPredicted RBP7.24□□□□□ -1.25
CLIP4-202ENST00000401605 CAPN10Q9HC96 672 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 CHPF2Q9P2E5 772 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 IQCA1LA6NCM1 817 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 DDNO94850 711 aaPredicted RBP7.23□□□□□ -1.25
CLIP4-202ENST00000401605 NTSR2O95665 410 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 PSMC1P62191 440 aaKnown RBP7.23□□□□□ -1.25
CLIP4-202ENST00000401605 OGFOD1Q8N543 542 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 KLRG1Q96E93 195 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 ASB16Q96NS5 453 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 MAF1Q9H063 256 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 ZNF277Q9NRM2 450 aaPredicted RBP7.23□□□□□ -1.25
CLIP4-202ENST00000401605 CWC25Q9NXE8 425 aaPredicted RBP7.23□□□□□ -1.25
CLIP4-202ENST00000401605 ADAMTS8Q9UP79 889 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 RIC1Q4ADV7 1423 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 RNF123Q5XPI4 1314 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 HOXB7P09629 217 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 CD46P15529 392 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 NAT1P18440 290 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 COPB2P35606 906 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 SOX11P35716 441 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 PROSER3Q2NL68 480 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 CCDC91Q7Z6B0 441 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 PMM1Q92871 262 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 NLRP3Q96P20 1036 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 UTP14AQ9BVJ6 771 aaKnown RBP7.23□□□□□ -1.25
CLIP4-202ENST00000401605 TRIM35Q9UPQ4 493 aa7.23□□□□□ -1.25
CLIP4-202ENST00000401605 CREB3O43889 395 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 ANXA1P04083 346 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 CASQ1P31415 396 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 IARSP41252 1262 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 MRE11P49959 708 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 HTRA3P83110 453 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 CBX1P83916 185 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 KIAA2012Q0VF49 1180 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 OLFM4Q6UX06 510 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 COPS6Q7L5N1 327 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 SYNE4Q8N205 404 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 FAM184AQ8NB25 1140 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 XAGE3Q8WTP9 111 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 JDP2Q8WYK2 163 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 RBM17Q96I25 401 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 CRAMP1Q96RY5 1269 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 ACBD3Q9H3P7 528 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 DDX21Q9NR30 783 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 CHCHD3Q9NX63 227 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 AFDNP55196 1824 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 STK10O94804 968 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 XRCC6P12956 609 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 DNAJA1P31689 397 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 AIMP1Q12904 312 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 SLC10A5Q5PT55 438 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 LSM14AQ8ND56 463 aaKnown RBP7.22□□□□□ -1.25
CLIP4-202ENST00000401605 TBC1D22AQ8WUA7 517 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 IRF2BPLQ9H1B7 796 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 CXorf56Q9H5V9 222 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 JADE2Q9NQC1 790 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 TRPC6Q9Y210 931 aa7.22□□□□□ -1.25
CLIP4-202ENST00000401605 FAM196BA6NMK8 535 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 FZD9O00144 591 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 EIF3JO75822 258 aaKnown RBP7.21□□□□□ -1.26
CLIP4-202ENST00000401605 ECM1Q16610 540 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 KRT24Q2M2I5 525 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 EAPPQ56P03 285 aaPredicted RBP7.21□□□□□ -1.26
CLIP4-202ENST00000401605 NLRP10Q86W26 655 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 MRPL42Q9Y6G3 142 aaKnown RBP7.21□□□□□ -1.26
CLIP4-202ENST00000401605 BCORQ6W2J9 1755 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 FSD2A1L4K1 749 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 ANKRD18BA2A2Z9 1011 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 PPEF1O14829 653 aaPredicted RBP7.21□□□□□ -1.26
CLIP4-202ENST00000401605 RBM5P52756 815 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLIP4-202ENST00000401605 PTK7Q13308 1070 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 TCIRG1Q13488 830 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 MFSD4BQ5TF39 518 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 IFFO2Q5TF58 517 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 LDHDQ86WU2 507 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms