RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 YDJCA8MPS7 323 aa18.64■□□□□ 0.57
CHRFAM7A-203ENST00000401522 LIG1P18858 919 aa18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 GTF2IP78347 998 aa18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 STRIP1Q5VSL9 837 aa18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 TTLL5Q6EMB2 1281 aa18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 FAM200AQ8TCP9 573 aa18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SEC62Q99442 399 aaKnown RBP18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 DSCC1Q9BVC3 393 aa18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 KCNQ5Q9NR82 932 aa18.63■□□□□ 0.57
CHRFAM7A-203ENST00000401522 UQCRHLA0A096LP55 91 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 UQCRHP07919 91 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 CHAF1AQ13111 956 aaPredicted RBP18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 RESTQ13127 1097 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 FAM173BQ6P4H8 233 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 TBC1D22AQ8WUA7 517 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SBF1O95248 1867 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 USP17L3A6NCW0 530 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 USP17L4A6NCW7 530 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 JAK2O60674 1132 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 PFKFB2O60825 505 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 USP17L1Q7RTZ2 530 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 BRF1Q92994 677 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 TNMDQ9H2S6 317 aa18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 PIH1D3Q9NQM4 214 aaKnown RBP18.62■□□□□ 0.57
CHRFAM7A-203ENST00000401522 CCDC88AQ3V6T2 1871 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SCN9AQ15858 1988 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 TYRO3Q06418 890 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 ZMYM1Q5SVZ6 1142 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 RBM43Q6ZSC3 357 aaKnown RBP18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SMARCC2Q8TAQ2 1214 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 JAG2Q9Y219 1238 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 H3BQV1 296 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 FZD9O00144 591 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 DYNC1I1O14576 645 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 IGSF3O75054 1194 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 FKBP1AP62942 108 aaKnown RBP18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 GLIPR1L2Q4G1C9 344 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 IFFO2Q5TF58 517 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 PDCL3Q9H2J4 239 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 DACT1Q9NYF0 836 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 TFIP11Q9UBB9 837 aaKnown RBP18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 KIF3AQ9Y496 699 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 MRVI1Q9Y6F6 885 aa18.61■□□□□ 0.57
CHRFAM7A-203ENST00000401522 GOLGA6L6A8MZA4 724 aa18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 FGD1P98174 961 aa18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 MFSD14BQ5SR56 506 aa18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 DACT2Q5SW24 774 aa18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SPTLC3Q9NUV7 552 aa18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 ABCF2Q9UG63 623 aa18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 CFAP45Q9UL16 551 aa18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 DICER1Q9UPY3 1922 aaKnown RBP18.6■□□□□ 0.57
CHRFAM7A-203ENST00000401522 CHGBP05060 677 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 HMGN5P82970 282 aaKnown RBP18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 NOLC1Q14978 699 aaKnown RBP eCLIP18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 NAA16Q6N069 864 aaPredicted RBP18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 CHMP4CQ96CF2 233 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 TTC12Q9H892 705 aaPredicted RBP18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SUGT1Q9Y2Z0 365 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 VIL1P09327 827 aaKnown RBP18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 CXCL9Q07325 125 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 SCRN1Q12765 414 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 ZNF830Q96NB3 372 aaPredicted RBP18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 MAP7D2Q96T17 732 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 AGXT2Q9BYV1 514 aa18.59■□□□□ 0.57
CHRFAM7A-203ENST00000401522 PSME4Q14997 1843 aa18.58■□□□□ 0.57
CHRFAM7A-203ENST00000401522 DOCK2Q92608 1830 aa18.58■□□□□ 0.57
CHRFAM7A-203ENST00000401522 ZNF646O15015 1829 aaPredicted RBP18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 AP5Z1O43299 807 aa18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 IDH1O75874 414 aaKnown RBP18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 RAD17O75943 681 aa18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 PLCB2Q00722 1185 aa18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 MAP3K12Q12852 859 aa18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 CAMK4Q16566 473 aa18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 CERS5Q8N5B7 392 aa18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 FBXW7Q969H0 707 aa18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.58■□□□□ 0.56
CHRFAM7A-203ENST00000401522 RNF113AO15541 343 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 PRDX5P30044 214 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 EXOSC10Q01780 885 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 LRRFIP1Q32MZ4 808 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 TMED8Q6PL24 325 aaPredicted RBP18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 BICD2Q8TD16 824 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 PSMD14O00487 310 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 CAVIN2O95810 425 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 LDHBP07195 334 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 TNIP1Q15025 636 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 C9orf131Q5VYM1 1079 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 CIAPIN1Q6FI81 312 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 ZSCAN25Q6NSZ9 544 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 NSUN7Q8NE18 718 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 PGBD1Q96JS3 809 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 PRIMPOLQ96LW4 560 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 RNF181Q9P0P0 153 aa18.57■□□□□ 0.56
CHRFAM7A-203ENST00000401522 MYO5AQ9Y4I1 1855 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms