RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ARHGDIAP52565 204 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 EVCP57679 992 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 FSCBQ5H9T9 825 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 TCF3P15923 654 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 HLA-DPA1P20036 260 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 TRIM47Q96LD4 638 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 SAMM50Q9Y512 469 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 COPB1P53618 953 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 SMTNP53814 917 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 VWA3BQ502W6 1294 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 GMEB1Q9Y692 573 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 RGS5O15539 181 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 ESRRBO95718 433 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 ZNF653Q96CK0 615 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 TSPYL4Q9UJ04 414 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 JRKLQ9Y4A0 524 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 DAB1O75553 588 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 CTTNQ14247 550 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 ZC3H12BQ5HYM0 836 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 L3MBTL3Q96JM7 780 aaPredicted RBP9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 IPO5O00410 1097 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 TRIM45Q9H8W5 580 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 H7C0S8 307 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 IFIH1Q9BYX4 1025 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 SUCLA2Q9P2R7 463 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 HORMAD1Q86X24 394 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 KRT23Q9C075 422 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CALM1P0DP23 149 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CALM2P0DP24 149 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CALM3P0DP25 149 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 UBA7P41226 1012 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 DACH2Q96NX9 599 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 PMS1P54277 932 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 NR5A1Q13285 461 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CCDC42Q96M95 316 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 GEMIN8Q9NWZ8 242 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 RIPOR2Q9Y4F9 1068 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 KDM4AO75164 1064 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 HPDP32754 393 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CCDC84Q86UT8 332 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 NOX5Q96PH1 765 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 QKIQ96PU8 341 aaKnown RBP eCLIP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 TUBB1Q9H4B7 451 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 ORC4O43929 436 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 NCAPG2Q86XI2 1143 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CRACR2BQ8N4Y2 399 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 PSMA7O14818 248 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 AIDAQ96BJ3 306 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 RBSNQ9H1K0 784 aa9.51□□□□□ -0.89
CACNA1C-220ENST00000399655 CWF19L2Q2TBE0 894 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 TUBB6Q9BUF5 446 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 ANGPTL2Q9UKU9 493 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 TEX28O15482 410 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 CYTH1Q15438 398 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 SEPT2Q15019 361 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 MIS18AQ9NYP9 233 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 OTUB1Q96FW1 271 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 SURF6O75683 361 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 STK3Q13188 491 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 PAPOLBQ9NRJ5 636 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 ARHGAP26Q9UNA1 814 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 KRT76Q01546 638 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 SRRM1Q8IYB3 904 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 PACSIN2Q9UNF0 486 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 SART1O43290 800 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 C10orf88Q9H8K7 445 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 CHCHD3Q9NX63 227 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 UBXN8O00124 270 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 HNRNPCP07910 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 PPP2R5AQ15172 486 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 ADCK1Q86TW2 530 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 MTBPQ96DY7 904 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 HNRNPMP52272 730 aaKnown RBP eCLIP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 LIN9Q5TKA1 542 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 TTC25Q96NG3 672 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 RIC8AQ9NPQ8 531 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 ZBBXA8MT70 800 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 TACO1Q9BSH4 297 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 TSKSQ9UJT2 592 aa9.5□□□□□ -0.89
CACNA1C-220ENST00000399655 MCF2LO15068 1137 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 CALML3P27482 149 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 ASPHQ12797 758 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 TRIML2Q8N7C3 387 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 TRIM6Q9C030 488 aaPredicted RBP9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 SYCE1Q8N0S2 351 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 TBC1D2Q9BYX2 928 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 WDR60Q8WVS4 1066 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 RAB17Q9H0T7 212 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 DDX28Q9NUL7 540 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 STX18Q9P2W9 335 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 BAIAP2L1Q9UHR4 511 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 TLDC2A0PJX2 215 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms