RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GOLGA6L9A6NEM1 432 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 SWAP70Q9UH65 585 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 STK10O94804 968 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 MCM7P33993 719 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.44
CACNA1C-216ENST00000399638 SPDYE6P0CI01 402 aa12.27□□□□□ -0.44
CACNA1C-216ENST00000399638 SETDB1Q15047 1291 aa12.27□□□□□ -0.44
CACNA1C-216ENST00000399638 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.44
CACNA1C-216ENST00000399638 ZSWIM4Q9H7M6 989 aa12.27□□□□□ -0.44
CACNA1C-216ENST00000399638 PRAG1Q86YV5 1406 aa12.27□□□□□ -0.44
CACNA1C-216ENST00000399638 CFAP157Q5JU67 520 aa12.27□□□□□ -0.44
CACNA1C-216ENST00000399638 FAM170AA1A519 330 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 TYW5A2RUC4 315 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 GNAT2P19087 354 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 SH2B1Q9NRF2 756 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 NEK1Q96PY6 1258 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 PLCH2O75038 1416 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 NEMFO60524 1076 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 CAVIN2O95810 425 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 WDR66Q8TBY9 1149 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 SELENOSQ9BQE4 189 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 ALG1Q9BT22 464 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 MOSPD1Q9UJG1 213 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 ARHGEF35A5YM69 484 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 CFBP00751 764 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 ATICP31939 592 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 MNAT1P51948 309 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 DALRD3Q5D0E6 543 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 CCDC94Q9BW85 323 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 JADE2Q9NQC1 790 aa12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 TRMT1Q9NXH9 659 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-216ENST00000399638 ATP2A1O14983 1001 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 GNA11P29992 359 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 SF3A3Q12874 501 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 PRR16Q569H4 304 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 GTF2IP78347 998 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 INF2Q27J81 1249 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 ECHDC1Q9NTX5 307 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 CALCOCO1Q9P1Z2 691 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 KRT2P35908 639 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 NAP1L4Q99733 375 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 SLC7A5P2Q9GIP4 190 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 RASAL2Q9UJF2 1139 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 SLC17A8Q8NDX2 589 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 PIDD1Q9HB75 910 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 KRT33BQ14525 404 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 MAP9Q49MG5 647 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 USP40Q9NVE5 1235 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 ATP6V0A2Q9Y487 856 aa12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-216ENST00000399638 HGSO14964 777 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 GTF2A1P52655 376 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 ZKSCAN3Q9BRR0 538 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 SUDS3Q9H7L9 328 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 ELF1P32519 619 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 RTEL1Q9NZ71 1219 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 EXOC7Q9UPT5 735 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 FANCAO15360 1455 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 FAM83GA6ND36 823 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 UAP1Q16222 522 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 NOX5Q96PH1 765 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 M0R2C6 588 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 URI1O94763 535 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 ALAS1P13196 640 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 HOXD10P28358 340 aa12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 GABPB2Q8TAK5 448 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 RBM46Q8TBY0 533 aaKnown RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 AATFQ9NY61 560 aaKnown RBP eCLIP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 TTF2Q9UNY4 1162 aaKnown RBP12.25□□□□□ -0.45
CACNA1C-216ENST00000399638 AKR1B10O60218 316 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 SLC4A1P02730 911 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 IL15P40933 162 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 NLRX1Q86UT6 975 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 N4BP2L2Q92802 583 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 KIFAP3Q92845 792 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 CNKSR1Q969H4 720 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 STIM2Q9P246 746 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms