RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
APOB-202ENST00000399256 SPECC1LQ69YQ0 1117 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 MAP3K14Q99558 947 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
APOB-202ENST00000399256 NFE2L3Q9Y4A8 694 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 AHDC1Q5TGY3 1603 aaPredicted RBP16.03■□□□□ 0.16
APOB-202ENST00000399256 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
APOB-202ENST00000399256 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.16
APOB-202ENST00000399256 AK7Q96M32 723 aa16.02■□□□□ 0.16
APOB-202ENST00000399256 PUS7LQ9H0K6 701 aaKnown RBP16.02■□□□□ 0.16
APOB-202ENST00000399256 LZTFL1Q9NQ48 299 aa16.02■□□□□ 0.16
APOB-202ENST00000399256 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.15
APOB-202ENST00000399256 ZNF213O14771 459 aa16.02■□□□□ 0.15
APOB-202ENST00000399256 GPR108Q9NPR9 543 aa16.02■□□□□ 0.15
APOB-202ENST00000399256 EYA2O00167 538 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 TRIM66O15016 1216 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 ADORA1P30542 326 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 METAP2P50579 478 aaKnown RBP eCLIP16.01■□□□□ 0.15
APOB-202ENST00000399256 C10orf67Q8IYJ2 551 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 A0A0U1RQJ8 604 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 SOWAHDA6NJG2 315 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 UBE2Q2LH0YL09 131 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 MCM6Q14566 821 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 TTC39AQ5SRH9 613 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 ATRIPQ8WXE1 791 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 MAN1B1Q9UKM7 699 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 CPDO75976 1380 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 MYO1BO43795 1136 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 CHMP4BP1P59074 171 aa16.01■□□□□ 0.15
APOB-202ENST00000399256 ZMYM6O95789 1325 aa16■□□□□ 0.15
APOB-202ENST00000399256 H7C1W4 665 aa16■□□□□ 0.15
APOB-202ENST00000399256 CUTAO60888 179 aa16■□□□□ 0.15
APOB-202ENST00000399256 MICU3Q86XE3 530 aa16■□□□□ 0.15
APOB-202ENST00000399256 GRAMD1CQ8IYS0 662 aa16■□□□□ 0.15
APOB-202ENST00000399256 SENP2Q9HC62 589 aa16■□□□□ 0.15
APOB-202ENST00000399256 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
APOB-202ENST00000399256 CCDC151A5D8V7 595 aa16■□□□□ 0.15
APOB-202ENST00000399256 PHKG2P15735 406 aa16■□□□□ 0.15
APOB-202ENST00000399256 SCARF1Q14162 830 aa16■□□□□ 0.15
APOB-202ENST00000399256 PI16Q6UXB8 463 aa16■□□□□ 0.15
APOB-202ENST00000399256 EXOC4Q96A65 974 aa16■□□□□ 0.15
APOB-202ENST00000399256 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
APOB-202ENST00000399256 SAMSN1Q9NSI8 373 aaKnown RBP16■□□□□ 0.15
APOB-202ENST00000399256 VPS18Q9P253 973 aa16■□□□□ 0.15
APOB-202ENST00000399256 FAM237AA0A1B0GTK4 181 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 MYO1CO00159 1063 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 CYB5R4Q7L1T6 521 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 IPO4Q8TEX9 1081 aaKnown RBP15.99■□□□□ 0.15
APOB-202ENST00000399256 RASSF4Q9H2L5 321 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 RAI14Q9P0K7 980 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 GRIN1Q05586 938 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
APOB-202ENST00000399256 GOLGA5Q8TBA6 731 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 MYL10Q9BUA6 226 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 NLRP2Q9NX02 1062 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 GPAA1O43292 621 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 CCDC175P0C221 793 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 ZNF18P17022 549 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 POSTNQ15063 836 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 CPLX3Q8WVH0 158 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
APOB-202ENST00000399256 ANKZF1Q9H8Y5 726 aa15.99■□□□□ 0.15
APOB-202ENST00000399256 CWC15Q9P013 229 aaKnown RBP15.99■□□□□ 0.15
APOB-202ENST00000399256 ANGEL1Q9UNK9 670 aaKnown RBP15.99■□□□□ 0.15
APOB-202ENST00000399256 MAP2K7O14733 419 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 ZAP70P43403 619 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 MDM2Q00987 491 aaPredicted RBP15.98■□□□□ 0.15
APOB-202ENST00000399256 BRD3Q15059 726 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 SRGAP1Q7Z6B7 1085 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
APOB-202ENST00000399256 NBPF3Q9H094 633 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 SUGCTQ9HAC7 445 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 ADAMTS7Q9UKP4 1686 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 TFRCP02786 760 aaKnown RBP15.98■□□□□ 0.15
APOB-202ENST00000399256 TRDNQ13061 729 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 TRIM29Q14134 588 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 WWC2Q6AWC2 1192 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 KRI1Q8N9T8 703 aaKnown RBP15.98■□□□□ 0.15
APOB-202ENST00000399256 PNKPQ96T60 521 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 CWC25Q9NXE8 425 aaPredicted RBP15.98■□□□□ 0.15
APOB-202ENST00000399256 CEP126Q9P2H0 1117 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 RSPH14Q9UHP6 348 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 SERTAD1Q9UHV2 236 aa15.98■□□□□ 0.15
APOB-202ENST00000399256 TNNT3P45378 269 aaPredicted RBP15.97■□□□□ 0.15
APOB-202ENST00000399256 PDE4CQ08493 712 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 TBC1D10CQ8IV04 446 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 APPBP2Q92624 585 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 CCDC85AQ96PX6 553 aaPredicted RBP15.97■□□□□ 0.15
APOB-202ENST00000399256 MED15Q96RN5 788 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
APOB-202ENST00000399256 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms