RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-202ENST00000399127 CNBD1Q8NA66 436 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 ZNF384Q8TF68 577 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 CYP2D7A0A087X1C5 515 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 GNAT2P19087 354 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 ME1P48163 572 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 ZNF827Q17R98 1081 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 TMEM87BQ96K49 555 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 CHD4Q14839 1912 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 MYH15Q9Y2K3 1946 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 GOLGA8AA7E2F4 631 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 KIF28PB7ZC32 967 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 PLSCR1O15162 318 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 CCDC192P0DO97 292 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 ZNF396Q96N95 335 aaPredicted RBP13.7□□□□□ -0.22
COL25A1-202ENST00000399127 RCOR1Q9UKL0 485 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 PPP4R3BQ5MIZ7 849 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 ZSCAN30Q86W11 494 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
COL25A1-202ENST00000399127 CCDC82Q8N4S0 544 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 GOLPH3LQ9H4A5 285 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 SLC12A7Q9Y666 1083 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
COL25A1-202ENST00000399127 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 TM4SF1P30408 202 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 TYRO3Q06418 890 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 PPARAQ07869 468 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
COL25A1-202ENST00000399127 ZNF830Q96NB3 372 aaPredicted RBP13.69□□□□□ -0.22
COL25A1-202ENST00000399127 ARID3AQ99856 593 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 RIOK1Q9BRS2 568 aaKnown RBP13.69□□□□□ -0.22
COL25A1-202ENST00000399127 ALG1Q9BT22 464 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 CLSTN2Q9H4D0 955 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 DDX19AQ9NUU7 478 aaKnown RBP13.69□□□□□ -0.22
COL25A1-202ENST00000399127 CLIC4Q9Y696 253 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 RANBP6O60518 1105 aaKnown RBP13.69□□□□□ -0.22
COL25A1-202ENST00000399127 SERPINB2P05120 415 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 FBXO33Q7Z6M2 555 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 STAG1Q8WVM7 1258 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 KRT23Q9C075 422 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 CNNM2Q9H8M5 875 aa13.69□□□□□ -0.22
COL25A1-202ENST00000399127 FAM217BQ9NTX9 383 aaPredicted RBP13.69□□□□□ -0.22
COL25A1-202ENST00000399127 PRDM1O75626 825 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 ADCY5O95622 1261 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
COL25A1-202ENST00000399127 PRDX5P30044 214 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 HIBADHP31937 336 aaKnown RBP13.68□□□□□ -0.22
COL25A1-202ENST00000399127 EVX2Q03828 476 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 SGMS1Q86VZ5 419 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 MSNP26038 577 aaKnown RBP13.68□□□□□ -0.22
COL25A1-202ENST00000399127 MECOMQ03112 1051 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 PRR5LQ6MZQ0 368 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 GPR101Q96P66 508 aaPredicted RBP13.68□□□□□ -0.22
COL25A1-202ENST00000399127 ANKIB1Q9P2G1 1089 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 COL24A1Q17RW2 1714 aa13.68□□□□□ -0.22
COL25A1-202ENST00000399127 TNRC6CQ9HCJ0 1690 aaKnown RBP13.68□□□□□ -0.22
COL25A1-202ENST00000399127 BAZ2AQ9UIF9 1905 aaKnown RBP13.68□□□□□ -0.22
COL25A1-202ENST00000399127 VGLL3A8MV65 326 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 IARSP41252 1262 aaKnown RBP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 LIFRP42702 1097 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 WTAPQ15007 396 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 NTRK3Q16288 839 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 ANO6Q4KMQ2 910 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 COL23A1Q86Y22 540 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 PCDHA7Q9UN72 937 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 AP5Z1O43299 807 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 CDKL5O76039 1030 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 ST5P78524 1137 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 STK38Q15208 465 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 MYSM1Q5VVJ2 828 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 CPLX2Q6PUV4 134 aaKnown RBP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 LUZP1Q86V48 1076 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 ANKRD2Q9GZV1 360 aa13.67□□□□□ -0.22
COL25A1-202ENST00000399127 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
COL25A1-202ENST00000399127 A0A087WWV3 80 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 HMGB2P26583 209 aaKnown RBP13.66□□□□□ -0.22
COL25A1-202ENST00000399127 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
COL25A1-202ENST00000399127 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
COL25A1-202ENST00000399127 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
COL25A1-202ENST00000399127 KRT40Q6A162 431 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 TIAM2Q8IVF5 1701 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 A0A1B0GVL5 298 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 ERICH2A1L162 156 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 DDR1Q08345 913 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms