RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TICAM2Q86XR7 235 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TEX11Q8IYF3 940 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 STRBPQ96SI9 672 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TMEM39BQ9GZU3 492 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 DEFB129Q9H1M3 183 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 MKRN1Q9UHC7 482 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 NAV1Q8NEY1 1877 aa14.97□□□□□ -0.01
HLA-DQB1-203ENST00000399082 PRKAB2O43741 272 aa14.96□□□□□ -0.01
HLA-DQB1-203ENST00000399082 CCDC129Q6ZRS4 1044 aa14.96□□□□□ -0.01
HLA-DQB1-203ENST00000399082 FAM83AQ86UY5 434 aa14.96□□□□□ -0.01
HLA-DQB1-203ENST00000399082 SULF1Q8IWU6 871 aa14.96□□□□□ -0.01
HLA-DQB1-203ENST00000399082 CDCA5Q96FF9 252 aa14.96□□□□□ -0.01
HLA-DQB1-203ENST00000399082 TRPM7Q96QT4 1865 aa14.96□□□□□ -0.01
HLA-DQB1-203ENST00000399082 ATRNL1Q5VV63 1379 aa14.96□□□□□ -0.02
HLA-DQB1-203ENST00000399082 RPAP1Q9BWH6 1393 aaPredicted RBP14.96□□□□□ -0.02
HLA-DQB1-203ENST00000399082 COL2A1P02458 1487 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 FLT1P17948 1338 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 GPAA1O43292 621 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 PLCG2P16885 1265 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CHMLP26374 656 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 TCP10Q12799 353 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 FSTL1Q12841 308 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 PICALMQ13492 652 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 ZNF589Q86UQ0 364 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 MAPKAPK5Q8IW41 473 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 TGFBRAP1Q8WUH2 860 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 SDR42E1Q8WUS8 393 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 FAM151AQ8WW52 585 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 NOL10Q9BSC4 688 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 OSBPL5Q9H0X9 879 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 TMOD2Q9NZR1 351 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 MYH1P12882 1939 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 BAZ2AQ9UIF9 1905 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 PAPPA2Q9BXP8 1791 aa14.95□□□□□ -0.02
HLA-DQB1-203ENST00000399082 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 ENTPD3O75355 529 aa14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 SLURP2P0DP57 97 aa14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 EVX2Q03828 476 aa14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 LRRFIP1Q32MZ4 808 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 NBPF12Q5TAG4 269 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 AIDAQ96BJ3 306 aa14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 EPB41L4AQ9HCS5 686 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 HELLSQ9NRZ9 838 aa14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 PPP2R3BQ9Y5P8 575 aa14.94□□□□□ -0.02
HLA-DQB1-203ENST00000399082 GSG1L2A8MUP6 293 aa14.93□□□□□ -0.02
HLA-DQB1-203ENST00000399082 TNFAIP1Q13829 316 aa14.93□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CST9Q5W186 159 aa14.93□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CWC27Q6UX04 472 aaKnown RBP14.93□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
HLA-DQB1-203ENST00000399082 SMIM22K7EJ46 135 aa14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 TNNI2P48788 182 aa14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 MCMDC2Q4G0Z9 681 aa14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 VPS53Q5VIR6 699 aa14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 DCP1AQ9NPI6 582 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 DIAPH3Q9NSV4 1193 aa14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 FZD1Q9UP38 647 aa14.92□□□□□ -0.02
HLA-DQB1-203ENST00000399082 OTOFQ9HC10 1997 aa14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 LAMB1P07942 1786 aa14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 HIP1O00291 1037 aa14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 USP5P45974 858 aa14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 SAP30BPQ9UHR5 308 aaKnown RBP14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 SLC4A4Q9Y6R1 1079 aa14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CCDC171Q6TFL3 1326 aa14.91□□□□□ -0.02
HLA-DQB1-203ENST00000399082 CYP2D6P10635 497 aa14.9□□□□□ -0.02
HLA-DQB1-203ENST00000399082 MOB2Q70IA6 237 aa14.9□□□□□ -0.02
HLA-DQB1-203ENST00000399082 PALD1Q9ULE6 856 aa14.9□□□□□ -0.02
HLA-DQB1-203ENST00000399082 SGSM2O43147 1006 aa14.89□□□□□ -0.03
HLA-DQB1-203ENST00000399082 CELF2O95319 508 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB1-203ENST00000399082 SLC4A8Q2Y0W8 1093 aa14.89□□□□□ -0.03
HLA-DQB1-203ENST00000399082 DNAJC18Q9H819 358 aa14.89□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ZNF408Q9H9D4 720 aa14.89□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ATP8A2Q9NTI2 1148 aa14.89□□□□□ -0.03
HLA-DQB1-203ENST00000399082 RAD50Q92878 1312 aa14.89□□□□□ -0.03
HLA-DQB1-203ENST00000399082 CYP2D7A0A087X1C5 515 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 FAM196BA6NMK8 535 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 PATL2C9JE40 543 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 CDC45O75419 566 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 HSPD1P10809 573 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 GNAT2P19087 354 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 PLCD1P51178 756 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 C1QTNF8P60827 252 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 MAP3K10Q02779 954 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 CTR9Q6PD62 1173 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 METTL16Q86W50 562 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 IFNL3Q8IZI9 196 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 CSRNP1Q96S65 589 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ESYT1Q9BSJ8 1104 aa14.88□□□□□ -0.03
HLA-DQB1-203ENST00000399082 USP2O75604 605 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-203ENST00000399082 SUPT20HL1Q3ZLR7 823 aa14.87□□□□□ -0.03
HLA-DQB1-203ENST00000399082 GIMAP6Q6P9H5 292 aa14.87□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ZSCAN29Q8IWY8 852 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-203ENST00000399082 MCM9Q9NXL9 1143 aa14.87□□□□□ -0.03
HLA-DQB1-203ENST00000399082 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 USP17L21D6R901 530 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 APLP1P51693 650 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 PTH1RQ03431 593 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 GABPAQ06546 454 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 PRKG1Q13976 671 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms