RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CACNB3P54284 484 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 PPP4CP60510 307 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 TNFAIP1Q13829 316 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
BRCC3-206ENST00000399042 USP50Q70EL3 339 aaPredicted RBP10.67□□□□□ -0.7
BRCC3-206ENST00000399042 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 MAPKAPK5Q8IW41 473 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
BRCC3-206ENST00000399042 NAPBQ9H115 298 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 ZNF70Q9UC06 446 aaPredicted RBP10.67□□□□□ -0.7
BRCC3-206ENST00000399042 PCDHAC2Q9Y5I4 1007 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 PATL2C9JE40 543 aaKnown RBP10.66□□□□□ -0.7
BRCC3-206ENST00000399042 WNT10BO00744 389 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 SGSM2O43147 1006 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 MCCP23508 829 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 TCP10Q12799 353 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 ANGEL2Q5VTE6 544 aaKnown RBP10.66□□□□□ -0.7
BRCC3-206ENST00000399042 ZNF589Q86UQ0 364 aaPredicted RBP10.66□□□□□ -0.7
BRCC3-206ENST00000399042 SULF1Q8IWU6 871 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 MTMR14Q8NCE2 650 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 TRPM4Q8TD43 1214 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 ZNF384Q8TF68 577 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 SDR42E1Q8WUS8 393 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 TAF1DQ9H5J8 278 aaPredicted RBP10.66□□□□□ -0.7
BRCC3-206ENST00000399042 MCM9Q9NXL9 1143 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 SAP30BPQ9UHR5 308 aaKnown RBP10.66□□□□□ -0.7
BRCC3-206ENST00000399042 CTNNA3Q9UI47 895 aa10.66□□□□□ -0.7
BRCC3-206ENST00000399042 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 PRKAB2O43741 272 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 EGFRP00533 1210 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 SLC3A2P08195 630 aaKnown RBP10.65□□□□□ -0.7
BRCC3-206ENST00000399042 SLC4A8Q2Y0W8 1093 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 APOBEC3FQ8IUX4 373 aaKnown RBP10.65□□□□□ -0.7
BRCC3-206ENST00000399042 RIOK1Q9BRS2 568 aaKnown RBP10.65□□□□□ -0.7
BRCC3-206ENST00000399042 NMRK2Q9NPI5 230 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 ATP8A2Q9NTI2 1148 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 GGA3Q9NZ52 723 aa10.65□□□□□ -0.7
BRCC3-206ENST00000399042 SCN9AQ15858 1988 aa10.65□□□□□ -0.71
BRCC3-206ENST00000399042 MYH13Q9UKX3 1938 aa10.64□□□□□ -0.71
BRCC3-206ENST00000399042 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
BRCC3-206ENST00000399042 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
BRCC3-206ENST00000399042 HSPD1P10809 573 aaKnown RBP10.64□□□□□ -0.71
BRCC3-206ENST00000399042 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
BRCC3-206ENST00000399042 CRACR2BQ8N4Y2 399 aaPredicted RBP10.64□□□□□ -0.71
BRCC3-206ENST00000399042 TOMM22Q9NS69 142 aa10.64□□□□□ -0.71
BRCC3-206ENST00000399042 AKAP11Q9UKA4 1901 aa10.64□□□□□ -0.71
BRCC3-206ENST00000399042 SBF1O95248 1867 aa10.64□□□□□ -0.71
BRCC3-206ENST00000399042 ZNF213O14771 459 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 HIRAP54198 1017 aaPredicted RBP10.63□□□□□ -0.71
BRCC3-206ENST00000399042 RHBDL3P58872 404 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 NFIAQ12857 509 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 RASA3Q14644 834 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 IMMTQ16891 758 aaKnown RBP10.63□□□□□ -0.71
BRCC3-206ENST00000399042 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 KRT26Q7Z3Y9 468 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 TTC6Q86TZ1 520 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 IFNL3Q8IZI9 196 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 ZC3H15Q8WU90 426 aaKnown RBP10.63□□□□□ -0.71
BRCC3-206ENST00000399042 DSCC1Q9BVC3 393 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 DCP1AQ9NPI6 582 aaPredicted RBP10.63□□□□□ -0.71
BRCC3-206ENST00000399042 PCDHB8Q9UN66 801 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 SCAF8Q9UPN6 1271 aaKnown RBP10.63□□□□□ -0.71
BRCC3-206ENST00000399042 TIAM2Q8IVF5 1701 aa10.63□□□□□ -0.71
BRCC3-206ENST00000399042 RPAP1Q9BWH6 1393 aaPredicted RBP10.63□□□□□ -0.71
BRCC3-206ENST00000399042 ASTN2O75129 1339 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 FLT1P17948 1338 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 USP17L21D6R901 530 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 ENTPD3O75355 529 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 WDHD1O75717 1129 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 ZKSCAN1P17029 563 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 NF2P35240 595 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 C8orf34Q49A92 452 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 FKBP1CQ5VVH2 108 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 GIMAP6Q6P9H5 292 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 USP48Q86UV5 1035 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 LDHDQ86WU2 507 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 FAM151AQ8WW52 585 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 ZBED3Q96IU2 234 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 CSRNP1Q96S65 589 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 IDI2Q9BXS1 227 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 TMEM39BQ9GZU3 492 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 OSBPL5Q9H0X9 879 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 DEFB129Q9H1M3 183 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 DHX36Q9H2U1 1008 aaKnown RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 ARPP21Q9UBL0 812 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
BRCC3-206ENST00000399042 DICER1Q9UPY3 1922 aaKnown RBP10.62□□□□□ -0.71
BRCC3-206ENST00000399042 FGAP02671 866 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 HAND2P61296 217 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 PTH1RQ03431 593 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 TRDNQ13061 729 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms