RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 HOMER1Q86YM7 354 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 CNBD1Q8NA66 436 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 CCDC150Q8NCX0 1101 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 MPHOSPH8Q99549 860 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 ADAM21Q9UKJ8 722 aa11.69□□□□□ -0.54
HMGCLL1-205ENST00000398661 ETF1P62495 437 aaKnown RBP11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 FKBP4Q02790 459 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 PARP10Q53GL7 1025 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 CNTROBQ8N137 903 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 CARD6Q9BX69 1037 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 HDAC5Q9UQL6 1122 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 RIPOR2Q9Y4F9 1068 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 CTAGE5O15320 804 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 MAGEA9P43362 315 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 EVCP57679 992 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 PRPF40BQ6NWY9 871 aaKnown RBP11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
HMGCLL1-205ENST00000398661 IVLP07476 585 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 ARMCX5Q6P1M9 558 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 CDHR2Q9BYE9 1310 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 URI1O94763 535 aaPredicted RBP11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 ZBTB7AO95365 584 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 PTH1RQ03431 593 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 LEKR1Q6ZMV7 388 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 AOPEPQ8N6M6 819 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 KCNB2Q92953 911 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 XAGE2Q96GT9 111 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 SEC62Q99442 399 aaKnown RBP11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 PLA2G12BQ9BX93 195 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 EPC1Q9H2F5 836 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 TOMM22Q9NS69 142 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
HMGCLL1-205ENST00000398661 CCP110O43303 1012 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 NRDCO43847 1150 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 SFPQP23246 707 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 SLC15A2Q16348 729 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 TSGA10IPQ3SY00 556 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 CCDC152Q4G0S7 254 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 DRC1Q96MC2 740 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 NLRP3Q96P20 1036 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 TTC41PQ6P2S7 1318 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 POLRMTO00411 1230 aaKnown RBP11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 GOLIM4O00461 696 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 IL15P40933 162 aaPredicted RBP11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 PHKA1P46020 1223 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 BCAMP50895 628 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 TMC6Q7Z403 805 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 TXNRD3Q86VQ6 643 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 GPR161Q8N6U8 529 aaKnown RBP11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 FUT8Q9BYC5 575 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 ARFGAP3Q9NP61 516 aa11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 PPP1R1BQ9UD71 204 aaPredicted RBP11.66□□□□□ -0.54
HMGCLL1-205ENST00000398661 A0A087WWV3 80 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 H3BQF6 201 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 ATP2B1P20020 1258 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 TM4SF1P30408 202 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 GYG1P46976 350 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 CHRNDQ07001 517 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 TRIM65Q6PJ69 517 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 DHX8Q14562 1220 aaKnown RBP11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
HMGCLL1-205ENST00000398661 CLGNO14967 610 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 SMC2O95347 1197 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 CHRNA5P30532 468 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 RESTQ13127 1097 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 COL9A3Q14050 684 aaPredicted RBP11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 ANKRD36CQ5JPF3 1778 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 RIC1Q4ADV7 1423 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 EIF3CLB5ME19 914 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 PDE8BO95263 885 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 NECTIN1Q15223 517 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 AXDND1Q5T1B0 1012 aaPredicted RBP11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 EIF3CQ99613 913 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 XPO4Q9C0E2 1151 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 NAT10Q9H0A0 1025 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 DEF6Q9H4E7 631 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 RREB1Q92766 1687 aa11.64□□□□□ -0.55
HMGCLL1-205ENST00000398661 FANCGO15287 622 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 RPS6KA5O75582 802 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 APPP05067 770 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 IGHMBP2P38935 993 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms