RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PKN2Q16513 984 aaKnown RBP12.32□□□□□ -0.44
NIFKP1-201ENST00000398317 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
NIFKP1-201ENST00000398317 SERPINA10Q9UK55 444 aa12.32□□□□□ -0.44
NIFKP1-201ENST00000398317 LAMB1P07942 1786 aa12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 E9PSI1 815 aa12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 IGF2BP3O00425 579 aaKnown RBP eCLIP12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 ZBTB48P10074 688 aaPredicted RBP12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 NOM1Q5C9Z4 860 aaKnown RBP12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 VGLL2Q8N8G2 317 aa12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 USP44Q9H0E7 712 aa12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 PTPRCP08575 1304 aa12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
NIFKP1-201ENST00000398317 TK2O00142 265 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 PDE8BO95263 885 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 ALDH1A1P00352 501 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 BCAMP50895 628 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 INHBEP58166 350 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 TNFAIP1Q13829 316 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 CAVIN4Q5BKX8 364 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 FBXO46Q6PJ61 603 aaPredicted RBP12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 TEPSINQ96N21 525 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 TMEM39BQ9GZU3 492 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 ELP3Q9H9T3 547 aa12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 MKI67P46013 3256 aaKnown RBP12.3□□□□□ -0.44
NIFKP1-201ENST00000398317 UNCXA6NJT0 531 aa12.29□□□□□ -0.44
NIFKP1-201ENST00000398317 HRO43593 1189 aa12.29□□□□□ -0.44
NIFKP1-201ENST00000398317 CACNB3P54284 484 aa12.29□□□□□ -0.44
NIFKP1-201ENST00000398317 PTPN18Q99952 460 aa12.29□□□□□ -0.44
NIFKP1-201ENST00000398317 AK9Q5TCS8 1911 aa12.29□□□□□ -0.44
NIFKP1-201ENST00000398317 KIAA0100Q14667 2235 aaKnown RBP12.29□□□□□ -0.44
NIFKP1-201ENST00000398317 BRCA2P51587 3418 aa12.28□□□□□ -0.44
NIFKP1-201ENST00000398317 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
NIFKP1-201ENST00000398317 CRHR2Q13324 411 aa12.28□□□□□ -0.44
NIFKP1-201ENST00000398317 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.28□□□□□ -0.44
NIFKP1-201ENST00000398317 TBC1D22AQ8WUA7 517 aa12.28□□□□□ -0.44
NIFKP1-201ENST00000398317 OPTNQ96CV9 577 aa12.28□□□□□ -0.44
NIFKP1-201ENST00000398317 TRIM17Q9Y577 477 aa12.28□□□□□ -0.44
NIFKP1-201ENST00000398317 IFIT1P09914 478 aaKnown RBP12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 FGFR2P21802 821 aa12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 TNNI2P48788 182 aa12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 OTUD7BQ6GQQ9 843 aa12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 TEKT1Q969V4 418 aa12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 SMC4Q9NTJ3 1288 aa12.27□□□□□ -0.45
NIFKP1-201ENST00000398317 EYA2O00167 538 aa12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 HDLBPQ00341 1268 aaKnown RBP12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 VGLL4Q14135 290 aa12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 ALDH1L2Q3SY69 923 aa12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 CD99L2Q8TCZ2 262 aa12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 RNF166Q96A37 237 aaPredicted RBP12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 SIL1Q9H173 461 aa12.26□□□□□ -0.45
NIFKP1-201ENST00000398317 SLC5A1P13866 664 aa12.25□□□□□ -0.45
NIFKP1-201ENST00000398317 CAP1Q01518 475 aa12.25□□□□□ -0.45
NIFKP1-201ENST00000398317 APOBEC3HQ6NTF7 200 aaKnown RBP12.25□□□□□ -0.45
NIFKP1-201ENST00000398317 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
NIFKP1-201ENST00000398317 BRI3BPQ8WY22 251 aa12.25□□□□□ -0.45
NIFKP1-201ENST00000398317 CCL15-CCL14A0A0B4J2E2 113 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 CCL15Q16663 113 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 TRMT2AQ8IZ69 625 aaKnown RBP12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 LPIN2Q92539 896 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 ERO1AQ96HE7 468 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 MRIQ9BWK5 157 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 SLC4A5Q9BY07 1137 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 TMOD2Q9NZR1 351 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 CSADQ9Y600 493 aa12.24□□□□□ -0.45
NIFKP1-201ENST00000398317 MAST3O60307 1309 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 GTF2A2P52657 109 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 SP3Q02447 781 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 HHIPL2Q6UWX4 724 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 MIGA2Q7L4E1 593 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 ZKSCAN4Q969J2 545 aaPredicted RBP12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 WRNIP1Q96S55 665 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 KIAA1468Q9P260 1216 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 PA2G4Q9UQ80 394 aaKnown RBP12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 SUGT1Q9Y2Z0 365 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 SNCAIPQ9Y6H5 919 aa12.23□□□□□ -0.45
NIFKP1-201ENST00000398317 MYH2Q9UKX2 1941 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 TAF1CQ15572 869 aaPredicted RBP12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 DIXDC1Q155Q3 683 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 FAM43AQ8N2R8 423 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 WDR66Q8TBY9 1149 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 CEP126Q9P2H0 1117 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 FAM198AQ9UFP1 575 aa12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
NIFKP1-201ENST00000398317 PTPN22Q9Y2R2 807 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms