RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RPAP1Q9BWH6 1393 aaPredicted RBP30.68■■■□□ 2.5
TSPAN4-207ENST00000397411 SSC5DA1L4H1 1573 aa30.68■■■□□ 2.5
TSPAN4-207ENST00000397411 AOC2O75106 756 aa30.68■■■□□ 2.5
TSPAN4-207ENST00000397411 MAP3K11Q16584 847 aa30.68■■■□□ 2.5
TSPAN4-207ENST00000397411 LDLRAD1Q5T700 205 aa30.68■■■□□ 2.5
TSPAN4-207ENST00000397411 MIGA2Q7L4E1 593 aa30.68■■■□□ 2.5
TSPAN4-207ENST00000397411 TGFBRAP1Q8WUH2 860 aa30.68■■■□□ 2.5
TSPAN4-207ENST00000397411 NPM3O75607 178 aaKnown RBP30.67■■■□□ 2.5
TSPAN4-207ENST00000397411 NOGQ13253 232 aa30.67■■■□□ 2.5
TSPAN4-207ENST00000397411 CSRNP1Q96S65 589 aa30.67■■■□□ 2.5
TSPAN4-207ENST00000397411 MAP2K2P36507 400 aa30.66■■■□□ 2.5
TSPAN4-207ENST00000397411 USP5P45974 858 aa30.66■■■□□ 2.5
TSPAN4-207ENST00000397411 ANKRD13AQ8IZ07 590 aa30.66■■■□□ 2.5
TSPAN4-207ENST00000397411 PI4K2BQ8TCG2 481 aa30.66■■■□□ 2.5
TSPAN4-207ENST00000397411 ZNF341Q9BYN7 854 aa30.66■■■□□ 2.5
TSPAN4-207ENST00000397411 UNCXA6NJT0 531 aa30.65■■■□□ 2.5
TSPAN4-207ENST00000397411 ADD2P35612 726 aa30.65■■■□□ 2.5
TSPAN4-207ENST00000397411 PDE1AP54750 535 aa30.65■■■□□ 2.5
TSPAN4-207ENST00000397411 MAP3K9P80192 1104 aa30.65■■■□□ 2.5
TSPAN4-207ENST00000397411 LRRFIP1Q32MZ4 808 aaKnown RBP30.65■■■□□ 2.5
TSPAN4-207ENST00000397411 MAPKAPK5Q8IW41 473 aa30.65■■■□□ 2.5
TSPAN4-207ENST00000397411 STAP2Q9UGK3 403 aa30.65■■■□□ 2.5
TSPAN4-207ENST00000397411 SLC10A3P09131 477 aa30.64■■■□□ 2.5
TSPAN4-207ENST00000397411 RASAL3Q86YV0 1011 aa30.64■■■□□ 2.5
TSPAN4-207ENST00000397411 KBTBD3Q8NAB2 608 aa30.64■■■□□ 2.5
TSPAN4-207ENST00000397411 OSBPL5Q9H0X9 879 aaPredicted RBP30.64■■■□□ 2.5
TSPAN4-207ENST00000397411 CSADQ9Y600 493 aa30.64■■■□□ 2.5
TSPAN4-207ENST00000397411 MYH7P12883 1935 aa30.63■■■□□ 2.49
TSPAN4-207ENST00000397411 TCRBV5S4A2TA0A5A2 114 aa30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 DDTLA6NHG4 134 aaPredicted RBP30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 MAP2K1Q02750 393 aaPredicted RBP30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 UBE3CQ15386 1083 aa30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 SH3BP5LQ7L8J4 393 aa30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 CLMNQ96JQ2 1002 aa30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 WRNIP1Q96S55 665 aa30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 CRNKL1Q9BZJ0 848 aaKnown RBP30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 SALL3Q9BXA9 1300 aa30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 RFX7Q2KHR2 1363 aa30.62■■■□□ 2.49
TSPAN4-207ENST00000397411 FAM155AB1AL88 458 aaPredicted RBP30.61■■■□□ 2.49
TSPAN4-207ENST00000397411 MKRN3Q13064 507 aaKnown RBP30.61■■■□□ 2.49
TSPAN4-207ENST00000397411 FSD1Q9BTV5 496 aa30.61■■■□□ 2.49
TSPAN4-207ENST00000397411 BEGAINQ9BUH8 593 aa30.61■■■□□ 2.49
TSPAN4-207ENST00000397411 KIF23Q02241 960 aaPredicted RBP30.6■■■□□ 2.49
TSPAN4-207ENST00000397411 SLFNL1Q499Z3 407 aa30.6■■■□□ 2.49
TSPAN4-207ENST00000397411 AIDAQ96BJ3 306 aa30.6■■■□□ 2.49
TSPAN4-207ENST00000397411 DHX36Q9H2U1 1008 aaKnown RBP30.6■■■□□ 2.49
TSPAN4-207ENST00000397411 ELP3Q9H9T3 547 aa30.6■■■□□ 2.49
TSPAN4-207ENST00000397411 CEP350Q5VT06 3117 aa30.59■■■□□ 2.49
TSPAN4-207ENST00000397411 FLT1P17948 1338 aa30.59■■■□□ 2.49
TSPAN4-207ENST00000397411 RNF113AO15541 343 aaKnown RBP30.59■■■□□ 2.49
TSPAN4-207ENST00000397411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.59■■■□□ 2.493e-7■■■□□ 17.9
TSPAN4-207ENST00000397411 RIOK1Q9BRS2 568 aaKnown RBP30.59■■■□□ 2.49
TSPAN4-207ENST00000397411 TRIM34Q9BYJ4 488 aa30.59■■■□□ 2.49
TSPAN4-207ENST00000397411 SAP30BPQ9UHR5 308 aaKnown RBP30.59■■■□□ 2.49
TSPAN4-207ENST00000397411 ZFYP08048 801 aaPredicted RBP30.58■■■□□ 2.49
TSPAN4-207ENST00000397411 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.58■■■□□ 2.49
TSPAN4-207ENST00000397411 ARMT1Q9H993 441 aa30.58■■■□□ 2.49
TSPAN4-207ENST00000397411 MBD4O95243 580 aa30.57■■■□□ 2.48
TSPAN4-207ENST00000397411 PLEKHM2Q8IWE5 1019 aa30.57■■■□□ 2.48
TSPAN4-207ENST00000397411 ZKSCAN4Q969J2 545 aaPredicted RBP30.57■■■□□ 2.48
TSPAN4-207ENST00000397411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.57■■■□□ 2.481e-7■■■■■ 39.7
TSPAN4-207ENST00000397411 PI4KBQ9UBF8 816 aa30.57■■■□□ 2.48
TSPAN4-207ENST00000397411 CDK5RAP2Q96SN8 1893 aa30.57■■■□□ 2.48
TSPAN4-207ENST00000397411 TRIM6-TRIM34B2RNG4 842 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 HLA-DOAP06340 250 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 VGLL4Q14135 290 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 SPRYD7Q5W111 196 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 LCORLQ8N3X6 602 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 EVI5LQ96CN4 794 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 ZIC5Q96T25 663 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 PALD1Q9ULE6 856 aa30.56■■■□□ 2.48
TSPAN4-207ENST00000397411 ATRNL1Q5VV63 1379 aa30.55■■■□□ 2.48
TSPAN4-207ENST00000397411 CHGBP05060 677 aa30.55■■■□□ 2.48
TSPAN4-207ENST00000397411 HSPA1AP0DMV8 641 aaKnown RBP30.55■■■□□ 2.48
TSPAN4-207ENST00000397411 HSPA1BP0DMV9 641 aaKnown RBP30.55■■■□□ 2.48
TSPAN4-207ENST00000397411 REM2Q8IYK8 340 aaPredicted RBP30.55■■■□□ 2.48
TSPAN4-207ENST00000397411 CRACR2BQ8N4Y2 399 aaPredicted RBP30.55■■■□□ 2.48
TSPAN4-207ENST00000397411 WNK4Q96J92 1243 aa30.55■■■□□ 2.48
TSPAN4-207ENST00000397411 INPP5BP32019 993 aa30.54■■■□□ 2.48
TSPAN4-207ENST00000397411 DDRGK1Q96HY6 314 aa30.54■■■□□ 2.48
TSPAN4-207ENST00000397411 ZNF112Q9UJU3 913 aa30.54■■■□□ 2.48
TSPAN4-207ENST00000397411 COL2A1P02458 1487 aaPredicted RBP30.54■■■□□ 2.48
TSPAN4-207ENST00000397411 FOCADQ5VW36 1801 aa30.54■■■□□ 2.48
TSPAN4-207ENST00000397411 MYH1P12882 1939 aa30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 TBC1D12O60347 775 aa30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 POLR3DP05423 398 aaPredicted RBP30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 SLC4A8Q2Y0W8 1093 aa30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 FOXP4Q8IVH2 680 aaPredicted RBP30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 APPBP2Q92624 585 aa30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 RILPL2Q969X0 211 aa30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 OPTNQ96CV9 577 aa30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 WBP1LQ9NX94 342 aa30.53■■■□□ 2.48
TSPAN4-207ENST00000397411 ZBTB48P10074 688 aaPredicted RBP30.52■■■□□ 2.48
TSPAN4-207ENST00000397411 TTC6Q86TZ1 520 aa30.52■■■□□ 2.48
TSPAN4-207ENST00000397411 PUS7LQ9H0K6 701 aaKnown RBP30.52■■■□□ 2.48
TSPAN4-207ENST00000397411 MAP3K10Q02779 954 aa30.51■■■□□ 2.47
TSPAN4-207ENST00000397411 SDR42E1Q8WUS8 393 aa30.51■■■□□ 2.47
TSPAN4-207ENST00000397411 OTUD5Q96G74 571 aa30.51■■■□□ 2.47
TSPAN4-207ENST00000397411 OSBPL3Q9H4L5 887 aa30.51■■■□□ 2.47
TSPAN4-207ENST00000397411 MCM9Q9NXL9 1143 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms