RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 APOBEC3FQ8IUX4 373 aaKnown RBP28.23■■■□□ 2.11
TSPAN4-203ENST00000397397 DCPSQ96C86 337 aaKnown RBP28.23■■■□□ 2.11
TSPAN4-203ENST00000397397 DDRGK1Q96HY6 314 aa28.23■■■□□ 2.11
TSPAN4-203ENST00000397397 POLR2AP24928 1970 aaKnown RBP28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 FOXP2O15409 715 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 TNNI2P48788 182 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 FSTL1Q12841 308 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 TNFAIP1Q13829 316 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 IFNL3Q8IZI9 196 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 SMC1BQ8NDV3 1235 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 DSCC1Q9BVC3 393 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 NACAP1Q9BZK3 213 aa28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 DCP1AQ9NPI6 582 aaPredicted RBP28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 SCAF8Q9UPN6 1271 aaKnown RBP28.22■■■□□ 2.11
TSPAN4-203ENST00000397397 PITPNM2Q9BZ72 1349 aa28.21■■■□□ 2.11
TSPAN4-203ENST00000397397 ENTPD3O75355 529 aa28.21■■■□□ 2.11
TSPAN4-203ENST00000397397 NPM3O75607 178 aaKnown RBP28.21■■■□□ 2.11
TSPAN4-203ENST00000397397 PTH1RQ03431 593 aa28.21■■■□□ 2.11
TSPAN4-203ENST00000397397 EPB41L4AQ9HCS5 686 aaPredicted RBP28.21■■■□□ 2.11
TSPAN4-203ENST00000397397 PGAP2Q9UHJ9 254 aa28.21■■■□□ 2.11
TSPAN4-203ENST00000397397 BAZ2AQ9UIF9 1905 aaKnown RBP28.21■■■□□ 2.11
TSPAN4-203ENST00000397397 MYH1P12882 1939 aa28.2■■■□□ 2.11
TSPAN4-203ENST00000397397 REC8O95072 547 aa28.2■■■□□ 2.11
TSPAN4-203ENST00000397397 TDO2P48775 406 aa28.2■■■□□ 2.11
TSPAN4-203ENST00000397397 GIMAP6Q6P9H5 292 aa28.2■■■□□ 2.11
TSPAN4-203ENST00000397397 LSG1Q9H089 658 aaKnown RBP28.2■■■□□ 2.11
TSPAN4-203ENST00000397397 OSBPL5Q9H0X9 879 aaPredicted RBP28.2■■■□□ 2.11
TSPAN4-203ENST00000397397 SAP30BPQ9UHR5 308 aaKnown RBP28.2■■■□□ 2.11
TSPAN4-203ENST00000397397 FAM83AQ86UY5 434 aa28.19■■■□□ 2.1
TSPAN4-203ENST00000397397 ZFPM1Q8IX07 1006 aa28.19■■■□□ 2.1
TSPAN4-203ENST00000397397 FAM151AQ8WW52 585 aa28.19■■■□□ 2.1
TSPAN4-203ENST00000397397 NAPBQ9H115 298 aa28.19■■■□□ 2.1
TSPAN4-203ENST00000397397 MCM9Q9NXL9 1143 aa28.19■■■□□ 2.1
TSPAN4-203ENST00000397397 MKRN1Q9UHC7 482 aaKnown RBP28.19■■■□□ 2.1
TSPAN4-203ENST00000397397 CNTNAP1P78357 1384 aa28.19■■■□□ 2.1
TSPAN4-203ENST00000397397 EIF5BO60841 1220 aaKnown RBP28.18■■■□□ 2.1
TSPAN4-203ENST00000397397 ALX1Q15699 326 aa28.18■■■□□ 2.1
TSPAN4-203ENST00000397397 LDHDQ86WU2 507 aa28.18■■■□□ 2.1
TSPAN4-203ENST00000397397 RASA3Q14644 834 aa28.18■■■□□ 2.1
TSPAN4-203ENST00000397397 FGAP02671 866 aa28.17■■■□□ 2.1
TSPAN4-203ENST00000397397 SULF1Q8IWU6 871 aa28.17■■■□□ 2.1
TSPAN4-203ENST00000397397 ZSCAN29Q8IWY8 852 aaPredicted RBP28.17■■■□□ 2.1
TSPAN4-203ENST00000397397 MAP4K1Q92918 833 aa28.17■■■□□ 2.1
TSPAN4-203ENST00000397397 TMEM39BQ9GZU3 492 aa28.17■■■□□ 2.1
TSPAN4-203ENST00000397397 DEFB129Q9H1M3 183 aa28.17■■■□□ 2.1
TSPAN4-203ENST00000397397 DDX60LQ5H9U9 1706 aaKnown RBP28.17■■■□□ 2.1
TSPAN4-203ENST00000397397 SEC24BO95487 1268 aa28.16■■■□□ 2.1
TSPAN4-203ENST00000397397 POLR3DP05423 398 aaPredicted RBP28.16■■■□□ 2.1
TSPAN4-203ENST00000397397 KRT26Q7Z3Y9 468 aa28.16■■■□□ 2.1
TSPAN4-203ENST00000397397 PALD1Q9ULE6 856 aa28.16■■■□□ 2.1
TSPAN4-203ENST00000397397 U3KPZ7 1027 aaPredicted RBP28.16■■■□□ 2.1
TSPAN4-203ENST00000397397 USP17L12C9JPN9 530 aa28.15■■■□□ 2.1
TSPAN4-203ENST00000397397 USP17L21D6R901 530 aa28.15■■■□□ 2.1
TSPAN4-203ENST00000397397 SLC4A8Q2Y0W8 1093 aa28.15■■■□□ 2.1
TSPAN4-203ENST00000397397 CTR9Q6PD62 1173 aa28.15■■■□□ 2.1
TSPAN4-203ENST00000397397 AMOTL1Q8IY63 956 aa28.15■■■□□ 2.1
TSPAN4-203ENST00000397397 ARPP21Q9UBL0 812 aaPredicted RBP28.15■■■□□ 2.1
TSPAN4-203ENST00000397397 ZMYM6O95789 1325 aa28.15■■■□□ 2.1
TSPAN4-203ENST00000397397 ADM5C9JUS6 153 aa28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 MAP1SQ66K74 1059 aaPredicted RBP28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 CHADLQ6NUI6 762 aa28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 SH3BP5LQ7L8J4 393 aa28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 USP48Q86UV5 1035 aa28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 CTNNA3Q9UI47 895 aa28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 PPP2R3BQ9Y5P8 575 aa28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 RBM8AQ9Y5S9 174 aaKnown RBP28.14■■■□□ 2.1
TSPAN4-203ENST00000397397 COL2A1P02458 1487 aaPredicted RBP28.14■■■□□ 2.09
TSPAN4-203ENST00000397397 DDTLA6NHG4 134 aaPredicted RBP28.13■■■□□ 2.09
TSPAN4-203ENST00000397397 MINDY4BA8MYZ0 360 aa28.13■■■□□ 2.09
TSPAN4-203ENST00000397397 CYP2D6P10635 497 aa28.13■■■□□ 2.09
TSPAN4-203ENST00000397397 SBK1Q52WX2 424 aa28.13■■■□□ 2.09
TSPAN4-203ENST00000397397 DHX36Q9H2U1 1008 aaKnown RBP28.13■■■□□ 2.09
TSPAN4-203ENST00000397397 CYP2D7A0A087X1C5 515 aa28.12■■■□□ 2.09
TSPAN4-203ENST00000397397 CDC37L1Q7L3B6 337 aa28.12■■■□□ 2.09
TSPAN4-203ENST00000397397 TTC6Q86TZ1 520 aa28.12■■■□□ 2.09
TSPAN4-203ENST00000397397 BACH2Q9BYV9 841 aa28.12■■■□□ 2.09
TSPAN4-203ENST00000397397 GLIS2Q9BZE0 524 aaPredicted RBP28.12■■■□□ 2.09
TSPAN4-203ENST00000397397 LAMB1P07942 1786 aa28.12■■■□□ 2.09
TSPAN4-203ENST00000397397 ATRNL1Q5VV63 1379 aa28.12■■■□□ 2.09
TSPAN4-203ENST00000397397 HLA-DOAP06340 250 aa28.11■■■□□ 2.09
TSPAN4-203ENST00000397397 C12orf60Q5U649 245 aa28.1■■■□□ 2.09
TSPAN4-203ENST00000397397 PRAMEF18Q5VWM3 479 aa28.1■■■□□ 2.09
TSPAN4-203ENST00000397397 CDAN1Q8IWY9 1227 aa28.1■■■□□ 2.09
TSPAN4-203ENST00000397397 TEPSINQ96N21 525 aa28.1■■■□□ 2.09
TSPAN4-203ENST00000397397 CSRNP1Q96S65 589 aa28.1■■■□□ 2.09
TSPAN4-203ENST00000397397 USP26Q9BXU7 913 aa28.1■■■□□ 2.09
TSPAN4-203ENST00000397397 PLCD1P51178 756 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 APLP1P51693 650 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 HTRA3P83110 453 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 ZNF213O14771 459 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 EPB41L2O43491 1005 aaKnown RBP28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 HAND2P61296 217 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 EVX2Q03828 476 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 PPARAQ07869 468 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 IMMTQ16891 758 aaKnown RBP28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 DLK2Q6UY11 383 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 PI4KBQ9UBF8 816 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 LAMA4Q16363 1823 aa28.09■■■□□ 2.09
TSPAN4-203ENST00000397397 NBPF12Q5TAG4 269 aaPredicted RBP28.08■■■□□ 2.09
TSPAN4-203ENST00000397397 SMIM22K7EJ46 135 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms