RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SPDYE2Q495Y8 402 aa27.99■■■□□ 2.07
TSPAN4-202ENST00000397396 RNF41Q9H4P4 317 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-202ENST00000397396 TDRD3Q9H7E2 651 aaKnown RBP27.99■■■□□ 2.07
TSPAN4-202ENST00000397396 ANAPC4Q9UJX5 808 aa27.99■■■□□ 2.07
TSPAN4-202ENST00000397396 GLTPD2A6NH11 291 aa27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 PCP11498 1178 aaKnown RBP27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 NT5C2P49902 561 aa27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 RABEP1Q15276 862 aa27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 TM6SF1Q9BZW5 370 aa27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 PALD1Q9ULE6 856 aa27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 COL2A1P02458 1487 aaPredicted RBP27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 CDK5RAP2Q96SN8 1893 aa27.98■■■□□ 2.07
TSPAN4-202ENST00000397396 USP17L12C9JPN9 530 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 USP17L21D6R901 530 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 WNT10BO00744 389 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 ENTPD3O75355 529 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 LAMB1P07942 1786 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 PPARAQ07869 468 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 PICALMQ13492 652 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 DDX60LQ5H9U9 1706 aaKnown RBP27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 CTR9Q6PD62 1173 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 ZNF70Q9UC06 446 aaPredicted RBP27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 TAOK2Q9UL54 1235 aa27.97■■■□□ 2.07
TSPAN4-202ENST00000397396 POLR3DP05423 398 aaPredicted RBP27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 HMGB1P09429 215 aaKnown RBP27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 TNFAIP1Q13829 316 aa27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 TTC6Q86TZ1 520 aa27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 RASEFQ8IZ41 740 aa27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 OSBPL5Q9H0X9 879 aaPredicted RBP27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 DHX36Q9H2U1 1008 aaKnown RBP27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 CNNM2Q9H8M5 875 aa27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 ADARB2Q9NS39 739 aaKnown RBP27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 PCDHAC2Q9Y5I4 1007 aa27.96■■■□□ 2.07
TSPAN4-202ENST00000397396 MINDY4BA8MYZ0 360 aa27.95■■■□□ 2.07
TSPAN4-202ENST00000397396 HAND2P61296 217 aa27.95■■■□□ 2.07
TSPAN4-202ENST00000397396 TRDNQ13061 729 aa27.95■■■□□ 2.07
TSPAN4-202ENST00000397396 ROBO3Q96MS0 1386 aa27.95■■■□□ 2.06
TSPAN4-202ENST00000397396 IQCA1LA6NCM1 817 aa27.94■■■□□ 2.06
TSPAN4-202ENST00000397396 HLA-DOAP06340 250 aa27.94■■■□□ 2.06
TSPAN4-202ENST00000397396 TNNI2P48788 182 aa27.94■■■□□ 2.06
TSPAN4-202ENST00000397396 TBC1D10BQ4KMP7 808 aaPredicted RBP27.94■■■□□ 2.06
TSPAN4-202ENST00000397396 STAG1Q8WVM7 1258 aa27.94■■■□□ 2.06
TSPAN4-202ENST00000397396 ZNF287Q9HBT7 754 aa27.94■■■□□ 2.06
TSPAN4-202ENST00000397396 BAZ2AQ9UIF9 1905 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 ANP32AP39687 249 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 RBM26Q5T8P6 1007 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 C12orf60Q5U649 245 aa27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 SAMD7Q7Z3H4 446 aa27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 RALYLQ86SE5 291 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 JAKMIP1Q96N16 626 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 KIF2CQ99661 725 aa27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 DDX4Q9NQI0 724 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 HACL1Q9UJ83 578 aa27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 RBM19Q9Y4C8 960 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-202ENST00000397396 SHTN1A0MZ66 631 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 E7EWF7 191 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 NFIAQ12857 509 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 AKNAD1Q5T1N1 836 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 MFSD6Q6ZSS7 791 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 FAM83AQ86UY5 434 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 NCOA7Q8NI08 942 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 NEK1Q96PY6 1258 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 MYH1P12882 1939 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 CLRN2A0PK11 232 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 EPS15P42566 896 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 PDE4BQ07343 736 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 NBPF9Q3BBW0 867 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 FAM151AQ8WW52 585 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 KRT23Q9C075 422 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 VEZTQ9HBM0 779 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 FAM198AQ9UFP1 575 aa27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 SAP30BPQ9UHR5 308 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-202ENST00000397396 ATRNL1Q5VV63 1379 aa27.91■■■□□ 2.06
TSPAN4-202ENST00000397396 ST18O60284 1047 aa27.91■■■□□ 2.06
TSPAN4-202ENST00000397396 BLOC1S2Q6QNY1 142 aa27.91■■■□□ 2.06
TSPAN4-202ENST00000397396 APOBEC3FQ8IUX4 373 aaKnown RBP27.91■■■□□ 2.06
TSPAN4-202ENST00000397396 TBC1D10CQ8IV04 446 aa27.91■■■□□ 2.06
TSPAN4-202ENST00000397396 CYP46A1Q9Y6A2 500 aa27.91■■■□□ 2.06
TSPAN4-202ENST00000397396 SCN4AP35499 1836 aa27.9■■■□□ 2.06
TSPAN4-202ENST00000397396 CASTP20810 708 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-202ENST00000397396 CACNB3P54284 484 aa27.9■■■□□ 2.06
TSPAN4-202ENST00000397396 ZSWIM6Q9HCJ5 1215 aa27.9■■■□□ 2.06
TSPAN4-202ENST00000397396 WDR90Q96KV7 1748 aa27.89■■■□□ 2.06
TSPAN4-202ENST00000397396 CTDSPL2Q05D32 466 aa27.89■■■□□ 2.05
TSPAN4-202ENST00000397396 ADCK5Q3MIX3 580 aa27.89■■■□□ 2.05
TSPAN4-202ENST00000397396 USP50Q70EL3 339 aaPredicted RBP27.89■■■□□ 2.05
TSPAN4-202ENST00000397396 ZSCAN29Q8IWY8 852 aaPredicted RBP27.89■■■□□ 2.05
TSPAN4-202ENST00000397396 TRPM4Q8TD43 1214 aa27.89■■■□□ 2.05
TSPAN4-202ENST00000397396 NBPF3Q9H094 633 aa27.89■■■□□ 2.05
TSPAN4-202ENST00000397396 EHD4Q9H223 541 aa27.89■■■□□ 2.05
TSPAN4-202ENST00000397396 PITPNM2Q9BZ72 1349 aa27.88■■■□□ 2.05
TSPAN4-202ENST00000397396 TCP10L2B9ZVM9 353 aa27.88■■■□□ 2.05
TSPAN4-202ENST00000397396 STOX1Q6ZVD7 989 aa27.88■■■□□ 2.05
TSPAN4-202ENST00000397396 RUFY3Q7L099 469 aa27.88■■■□□ 2.05
TSPAN4-202ENST00000397396 PI4KBQ9UBF8 816 aa27.88■■■□□ 2.05
TSPAN4-202ENST00000397396 SWAP70Q9UH65 585 aa27.88■■■□□ 2.05
TSPAN4-202ENST00000397396 ORC4O43929 436 aa27.87■■■□□ 2.05
TSPAN4-202ENST00000397396 EGFRP00533 1210 aa27.87■■■□□ 2.05
TSPAN4-202ENST00000397396 FGRP09769 529 aa27.87■■■□□ 2.05
TSPAN4-202ENST00000397396 TCP10Q12799 353 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms