RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 DDX46Q7L014 1031 aaKnown RBP13.62□□□□□ -0.23
FGFR1-208ENST00000397108 TMC6Q7Z403 805 aa13.62□□□□□ -0.23
FGFR1-208ENST00000397108 ARMCX5Q6P1M9 558 aa13.62□□□□□ -0.23
FGFR1-208ENST00000397108 TEX2Q8IWB9 1127 aa13.62□□□□□ -0.23
FGFR1-208ENST00000397108 PLA2G12BQ9BX93 195 aa13.62□□□□□ -0.23
FGFR1-208ENST00000397108 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
FGFR1-208ENST00000397108 RRP15Q9Y3B9 282 aaKnown RBP13.62□□□□□ -0.23
FGFR1-208ENST00000397108 CTSWP56202 376 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 NBPF11Q86T75 865 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 DICER1Q9UPY3 1922 aaKnown RBP13.61□□□□□ -0.23
FGFR1-208ENST00000397108 COL4A1P02462 1669 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
FGFR1-208ENST00000397108 GRM8O00222 908 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
FGFR1-208ENST00000397108 JAK2O60674 1132 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 TBC1D8O95759 1140 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 GRAPQ13588 217 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 STX1AQ16623 288 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 REXO1L1PQ8IX06 675 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
FGFR1-208ENST00000397108 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
FGFR1-208ENST00000397108 SNED1Q8TER0 1413 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 PTPN21Q16825 1174 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 CCDC152Q4G0S7 254 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 SRLQ86TD4 932 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 RHPN1Q8TCX5 695 aa13.61□□□□□ -0.23
FGFR1-208ENST00000397108 LTBP3Q9NS15 1303 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 NFKBIEO00221 500 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 BBOX1O75936 387 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 UTYO14607 1347 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 FANCGO15287 622 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 EVCP57679 992 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 CC2D2BQ6DHV5 1058 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 FOXR1Q6PIV2 292 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 CCAR1Q8IX12 1150 aaKnown RBP13.6□□□□□ -0.23
FGFR1-208ENST00000397108 C9orf78Q9NZ63 289 aaPredicted RBP13.6□□□□□ -0.23
FGFR1-208ENST00000397108 IFNKQ9P0W0 207 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 SPEF2Q9C093 1822 aa13.6□□□□□ -0.23
FGFR1-208ENST00000397108 PDCP20941 246 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 GRIPAP1Q4V328 841 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 ICE2Q659A1 982 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 TMC4Q7Z404 712 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 RTKN2Q8IZC4 609 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 GPATCH11Q8N954 259 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 XPO4Q9C0E2 1151 aaKnown RBP13.59□□□□□ -0.23
FGFR1-208ENST00000397108 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 ADAM21Q9UKJ8 722 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
FGFR1-208ENST00000397108 SFPQP23246 707 aaKnown RBP eCLIP13.59□□□□□ -0.23
FGFR1-208ENST00000397108 YY1P25490 414 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 RASSF7Q02833 373 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 GOLGA8FQ08AF8 430 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 GOLGA8DPQ0D2H9 430 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 CWC15Q9P013 229 aaKnown RBP13.59□□□□□ -0.23
FGFR1-208ENST00000397108 ATP6V0A2Q9Y487 856 aa13.59□□□□□ -0.23
FGFR1-208ENST00000397108 SART3Q15020 963 aaKnown RBP13.58□□□□□ -0.23
FGFR1-208ENST00000397108 CC2D1AQ6P1N0 951 aaPredicted RBP13.58□□□□□ -0.23
FGFR1-208ENST00000397108 OLFM4Q6UX06 510 aa13.58□□□□□ -0.23
FGFR1-208ENST00000397108 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.23
FGFR1-208ENST00000397108 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.23
FGFR1-208ENST00000397108 EPB41L2O43491 1005 aaKnown RBP13.58□□□□□ -0.24
FGFR1-208ENST00000397108 TADA3O75528 432 aa13.58□□□□□ -0.24
FGFR1-208ENST00000397108 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
FGFR1-208ENST00000397108 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.24
FGFR1-208ENST00000397108 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
FGFR1-208ENST00000397108 H3BQF6 201 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 H3BQV1 296 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 GSDMDP57764 484 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 IFFO2Q5TF58 517 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
FGFR1-208ENST00000397108 BRF1Q92994 677 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 USP44Q9H0E7 712 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 CSF1RP07333 972 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 LMNB1P20700 586 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 FOXO4P98177 505 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 FKBP4Q02790 459 aaKnown RBP eCLIP13.57□□□□□ -0.24
FGFR1-208ENST00000397108 LTBP1Q14766 1721 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 SKIDA1Q1XH10 827 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 SP8Q8IXZ3 490 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 ZSWIM4Q9H7M6 989 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 BIN1O00499 593 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
FGFR1-208ENST00000397108 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
FGFR1-208ENST00000397108 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 GOLGA5Q8TBA6 731 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 UBXN6Q9BZV1 441 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 SEC31BQ9NQW1 1179 aa13.57□□□□□ -0.24
FGFR1-208ENST00000397108 CAVIN2O95810 425 aa13.56□□□□□ -0.24
FGFR1-208ENST00000397108 PRELPP51888 382 aa13.56□□□□□ -0.24
FGFR1-208ENST00000397108 RPS8P62241 208 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms