RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SPTLC2O15270 562 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 SATB1Q01826 763 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 TNFAIP3P21580 790 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 GTF2F1P35269 517 aaKnown RBP eCLIP19.54■□□□□ 0.722e-6■■■■□ 22.9
MCF2L-208ENST00000397030 KARSQ15046 597 aaKnown RBP19.54■□□□□ 0.72
MCF2L-208ENST00000397030 MYCT1Q8N699 235 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 TRIM7Q9C029 511 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 CALUO43852 315 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-208ENST00000397030 PDE8AO60658 829 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 ATP8B2P98198 1209 aa19.54■□□□□ 0.72
MCF2L-208ENST00000397030 ZNF830Q96NB3 372 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-208ENST00000397030 CD19P15391 556 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 CACYBPQ9HB71 228 aaKnown RBP19.53■□□□□ 0.72
MCF2L-208ENST00000397030 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 ITKQ08881 620 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 TIMM10P62072 90 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 TSTA3Q13630 321 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-208ENST00000397030 APOL6Q9BWW8 343 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 QTRT2Q9H974 415 aaKnown RBP19.53■□□□□ 0.72
MCF2L-208ENST00000397030 A1BGP04217 495 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 KIF5AQ12840 1032 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 DNAJC25Q9H1X3 360 aa19.53■□□□□ 0.72
MCF2L-208ENST00000397030 TTF2Q9UNY4 1162 aaKnown RBP19.52■□□□□ 0.72
MCF2L-208ENST00000397030 MAPK8IP1Q9UQF2 711 aa19.52■□□□□ 0.72
MCF2L-208ENST00000397030 NEMFO60524 1076 aa19.52■□□□□ 0.72
MCF2L-208ENST00000397030 YARSP54577 528 aaKnown RBP19.52■□□□□ 0.72
MCF2L-208ENST00000397030 PDE1AP54750 535 aa19.52■□□□□ 0.72
MCF2L-208ENST00000397030 KIF9Q9HAQ2 790 aa19.52■□□□□ 0.72
MCF2L-208ENST00000397030 PDE4DQ08499 809 aa19.52■□□□□ 0.72
MCF2L-208ENST00000397030 ESYT1Q9BSJ8 1104 aa19.52■□□□□ 0.72
MCF2L-208ENST00000397030 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.72
MCF2L-208ENST00000397030 ESPNB1AK53 854 aa19.52■□□□□ 0.72
MCF2L-208ENST00000397030 RNASE9P60153 205 aaKnown RBP19.52■□□□□ 0.72
MCF2L-208ENST00000397030 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-208ENST00000397030 SH3TC1Q8TE82 1336 aa19.52■□□□□ 0.71
MCF2L-208ENST00000397030 CTAGE15A4D2H0 777 aa19.52■□□□□ 0.71
MCF2L-208ENST00000397030 CTAGE8P0CG41 777 aa19.52■□□□□ 0.71
MCF2L-208ENST00000397030 FAM102BQ5T8I3 360 aa19.52■□□□□ 0.71
MCF2L-208ENST00000397030 CTAGE6Q86UF2 777 aa19.52■□□□□ 0.71
MCF2L-208ENST00000397030 CTAGE4Q8IX94 777 aa19.52■□□□□ 0.71
MCF2L-208ENST00000397030 ORAI2Q96SN7 254 aa19.52■□□□□ 0.71
MCF2L-208ENST00000397030 DNM1Q05193 864 aaKnown RBP19.51■□□□□ 0.71
MCF2L-208ENST00000397030 LIN9Q5TKA1 542 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 SEC62Q99442 399 aaKnown RBP19.51■□□□□ 0.71
MCF2L-208ENST00000397030 IRAK4Q9NWZ3 460 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 A0A1B0GUL7 405 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 CASC4Q6P4E1 433 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 EPSTI1Q96J88 318 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 ALAS1P13196 640 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 WDR66Q8TBY9 1149 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 PCF11O94913 1555 aaKnown RBP19.51■□□□□ 0.71
MCF2L-208ENST00000397030 BSPRYQ5W0U4 402 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 XAGE2Q96GT9 111 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 NPATQ14207 1427 aa19.51■□□□□ 0.71
MCF2L-208ENST00000397030 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
MCF2L-208ENST00000397030 DKC1O60832 514 aaKnown RBP eCLIP19.5■□□□□ 0.717e-7■■■■■ 41.9
MCF2L-208ENST00000397030 SPAG1Q07617 926 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 KLHDC4Q8TBB5 520 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 NOX5Q96PH1 765 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 TBC1D2Q9BYX2 928 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 UHRF1BP1Q6BDS2 1440 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 FRMPD2Q68DX3 1309 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-208ENST00000397030 HSPA1LP34931 641 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 ADCY7P51828 1080 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 HAUS3Q68CZ6 603 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 OTUD7BQ6GQQ9 843 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 GIPC1O14908 333 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 GCNT3O95395 438 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 SYT1P21579 422 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.5■□□□□ 0.71
MCF2L-208ENST00000397030 ITIH3Q06033 890 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 CREB3L3Q68CJ9 461 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 LINS1Q8NG48 757 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 LZTFL1Q9NQ48 299 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 TRIM37O94972 964 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 FAM47AQ5JRC9 791 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 ZSCAN30Q86W11 494 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
MCF2L-208ENST00000397030 UBLCP1Q8WVY7 318 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-208ENST00000397030 EYA1Q99502 592 aa19.5■□□□□ 0.71
MCF2L-208ENST00000397030 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 DYMQ7RTS9 669 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 DPP9Q86TI2 863 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 NOC4LQ9BVI4 516 aaKnown RBP19.49■□□□□ 0.71
MCF2L-208ENST00000397030 TPH2Q8IWU9 490 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 MMS19Q96T76 1030 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 STMN4Q9H169 189 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-208ENST00000397030 LRMPQ12912 555 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 NAP1L3Q99457 506 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-208ENST00000397030 DNAI1Q9UI46 699 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 MTUS1Q9ULD2 1270 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-208ENST00000397030 DNAJC21Q5F1R6 531 aaKnown RBP19.49■□□□□ 0.71
MCF2L-208ENST00000397030 KIAA0825Q8IV33 1275 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 ATRIPQ8WXE1 791 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 LRFN2Q9ULH4 789 aa19.49■□□□□ 0.71
MCF2L-208ENST00000397030 FLT4P35916 1363 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms