RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ANGEL1Q9UNK9 670 aaKnown RBP35.46■■■■□ 3.27
CHCHD4-202ENST00000396914 ZFYP08048 801 aaPredicted RBP35.45■■■■□ 3.27
CHCHD4-202ENST00000396914 FKBP1BP68106 108 aa35.45■■■■□ 3.27
CHCHD4-202ENST00000396914 MAPKAPK5Q8IW41 473 aa35.45■■■■□ 3.27
CHCHD4-202ENST00000396914 HOOK2Q96ED9 719 aa35.45■■■■□ 3.27
CHCHD4-202ENST00000396914 PPP4R2Q9NY27 417 aa35.45■■■■□ 3.27
CHCHD4-202ENST00000396914 RFX7Q2KHR2 1363 aa35.44■■■■□ 3.26
CHCHD4-202ENST00000396914 ZBTB4Q9P1Z0 1013 aaPredicted RBP35.44■■■■□ 3.26
CHCHD4-202ENST00000396914 PAPPA2Q9BXP8 1791 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 UBE2Q2LH0YL09 131 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 MBD4O95243 580 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 GRM1Q13255 1194 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 DEFB115Q30KQ5 88 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 AIDAQ96BJ3 306 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 RIOK1Q9BRS2 568 aaKnown RBP35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 ARMT1Q9H993 441 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 RPAP1Q9BWH6 1393 aaPredicted RBP35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 SSC5DA1L4H1 1573 aa35.43■■■■□ 3.26
CHCHD4-202ENST00000396914 CSRNP1Q96S65 589 aa35.42■■■■□ 3.26
CHCHD4-202ENST00000396914 CRNKL1Q9BZJ0 848 aaKnown RBP35.42■■■■□ 3.26
CHCHD4-202ENST00000396914 OSBPL5Q9H0X9 879 aaPredicted RBP35.42■■■■□ 3.26
CHCHD4-202ENST00000396914 LCORLQ8N3X6 602 aa35.41■■■■□ 3.26
CHCHD4-202ENST00000396914 NPM3O75607 178 aaKnown RBP35.4■■■■□ 3.26
CHCHD4-202ENST00000396914 MIGA2Q7L4E1 593 aa35.4■■■■□ 3.26
CHCHD4-202ENST00000396914 IREB2P48200 963 aaKnown RBP35.4■■■■□ 3.26
CHCHD4-202ENST00000396914 APPBP2Q92624 585 aa35.4■■■■□ 3.26
CHCHD4-202ENST00000396914 PUS7LQ9H0K6 701 aaKnown RBP35.4■■■■□ 3.26
CHCHD4-202ENST00000396914 FLT1P17948 1338 aa35.39■■■■□ 3.26
CHCHD4-202ENST00000396914 DDTLA6NHG4 134 aaPredicted RBP35.39■■■■□ 3.26
CHCHD4-202ENST00000396914 RASSF10A6NK89 507 aa35.39■■■■□ 3.26
CHCHD4-202ENST00000396914 DCAF15Q66K64 600 aa35.39■■■■□ 3.26
CHCHD4-202ENST00000396914 SAP30BPQ9UHR5 308 aaKnown RBP35.39■■■■□ 3.26
CHCHD4-202ENST00000396914 SH3BP5LQ7L8J4 393 aa35.38■■■■□ 3.25
CHCHD4-202ENST00000396914 USP2O75604 605 aaPredicted RBP35.37■■■■□ 3.25
CHCHD4-202ENST00000396914 CDK5RAP2Q96SN8 1893 aa35.36■■■■□ 3.25
CHCHD4-202ENST00000396914 ZNF157P51786 506 aaPredicted RBP35.36■■■■□ 3.25
CHCHD4-202ENST00000396914 TTC22Q5TAA0 569 aa35.36■■■■□ 3.25
CHCHD4-202ENST00000396914 OSBP2Q969R2 916 aa35.36■■■■□ 3.25
CHCHD4-202ENST00000396914 SLC4A8Q2Y0W8 1093 aa35.35■■■■□ 3.25
CHCHD4-202ENST00000396914 CYP4F22Q6NT55 531 aa35.35■■■■□ 3.25
CHCHD4-202ENST00000396914 RGMBQ6NW40 437 aa35.35■■■■□ 3.25
CHCHD4-202ENST00000396914 SDR42E1Q8WUS8 393 aa35.35■■■■□ 3.25
CHCHD4-202ENST00000396914 HHIPL1Q96JK4 782 aa35.34■■■■□ 3.25
CHCHD4-202ENST00000396914 ZNF341Q9BYN7 854 aa35.34■■■■□ 3.25
CHCHD4-202ENST00000396914 PALD1Q9ULE6 856 aa35.34■■■■□ 3.25
CHCHD4-202ENST00000396914 SLC4A4Q9Y6R1 1079 aa35.34■■■■□ 3.25
CHCHD4-202ENST00000396914 FOCADQ5VW36 1801 aa35.34■■■■□ 3.25
CHCHD4-202ENST00000396914 SKAP1Q86WV1 359 aa35.33■■■■□ 3.25
CHCHD4-202ENST00000396914 DHX36Q9H2U1 1008 aaKnown RBP35.33■■■■□ 3.25
CHCHD4-202ENST00000396914 CAPNS2Q96L46 248 aa35.32■■■■□ 3.25
CHCHD4-202ENST00000396914 SEC62Q99442 399 aaKnown RBP35.32■■■■□ 3.25
CHCHD4-202ENST00000396914 ATRNL1Q5VV63 1379 aa35.32■■■■□ 3.24
CHCHD4-202ENST00000396914 M0R2C6 588 aa35.32■■■■□ 3.24
CHCHD4-202ENST00000396914 PRKAB2O43741 272 aa35.32■■■■□ 3.24
CHCHD4-202ENST00000396914 ECE1P42892 770 aa35.32■■■■□ 3.24
CHCHD4-202ENST00000396914 KLRG1Q96E93 195 aa35.32■■■■□ 3.24
CHCHD4-202ENST00000396914 DDRGK1Q96HY6 314 aa35.32■■■■□ 3.24
CHCHD4-202ENST00000396914 WRNIP1Q96S55 665 aa35.32■■■■□ 3.24
CHCHD4-202ENST00000396914 COL2A1P02458 1487 aaPredicted RBP35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 HLA-DOAP06340 250 aa35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 VEGFBP49765 207 aa35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 MAP3K11Q16584 847 aa35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 ZMYM1Q5SVZ6 1142 aa35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 ANKRD13AQ8IZ07 590 aa35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 DNAJC5GQ8N7S2 189 aa35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 TRIM34Q9BYJ4 488 aa35.31■■■■□ 3.24
CHCHD4-202ENST00000396914 GPAA1O43292 621 aa35.3■■■■□ 3.24
CHCHD4-202ENST00000396914 GSPT1P15170 499 aaKnown RBP35.3■■■■□ 3.24
CHCHD4-202ENST00000396914 LDLRAD1Q5T700 205 aa35.3■■■■□ 3.24
CHCHD4-202ENST00000396914 SLC10A4Q96EP9 437 aa35.3■■■■□ 3.24
CHCHD4-202ENST00000396914 STRBPQ96SI9 672 aaKnown RBP35.3■■■■□ 3.24
CHCHD4-202ENST00000396914 PI4KBQ9UBF8 816 aa35.3■■■■□ 3.24
CHCHD4-202ENST00000396914 POLR3DP05423 398 aaPredicted RBP35.29■■■■□ 3.24
CHCHD4-202ENST00000396914 MAP3K9P80192 1104 aa35.29■■■■□ 3.24
CHCHD4-202ENST00000396914 CRACR2BQ8N4Y2 399 aaPredicted RBP35.29■■■■□ 3.24
CHCHD4-202ENST00000396914 XPO5Q9HAV4 1204 aaKnown RBP eCLIP35.29■■■■□ 3.24
CHCHD4-202ENST00000396914 MCM9Q9NXL9 1143 aa35.29■■■■□ 3.24
CHCHD4-202ENST00000396914 CSADQ9Y600 493 aa35.29■■■■□ 3.24
CHCHD4-202ENST00000396914 CCDC102AQ96A19 550 aa35.28■■■■□ 3.24
CHCHD4-202ENST00000396914 CLMNQ96JQ2 1002 aa35.28■■■■□ 3.24
CHCHD4-202ENST00000396914 DCP1AQ9NPI6 582 aaPredicted RBP35.28■■■■□ 3.24
CHCHD4-202ENST00000396914 ATP8A2Q9NTI2 1148 aa35.28■■■■□ 3.24
CHCHD4-202ENST00000396914 CEP350Q5VT06 3117 aa35.28■■■■□ 3.24
CHCHD4-202ENST00000396914 WDR33Q9C0J8 1336 aaKnown RBP35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 MYH1P12882 1939 aa35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 FAM196BA6NMK8 535 aa35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 APPP05067 770 aa35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 SLURP2P0DP57 97 aa35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 SDSP20132 328 aa35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 DDX55Q8NHQ9 600 aaKnown RBP eCLIP35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 DIAPH3Q9NSV4 1193 aa35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 NAV1Q8NEY1 1877 aa35.27■■■■□ 3.24
CHCHD4-202ENST00000396914 TTC6Q86TZ1 520 aa35.26■■■■□ 3.24
CHCHD4-202ENST00000396914 TICAM2Q86XR7 235 aa35.26■■■■□ 3.24
CHCHD4-202ENST00000396914 FAM227BQ96M60 508 aa35.26■■■■□ 3.24
CHCHD4-202ENST00000396914 NMIQ13287 307 aaPredicted RBP35.25■■■■□ 3.23
CHCHD4-202ENST00000396914 ZKSCAN4Q969J2 545 aaPredicted RBP35.25■■■■□ 3.23
CHCHD4-202ENST00000396914 ELP3Q9H9T3 547 aa35.25■■■■□ 3.23
CHCHD4-202ENST00000396914 HELLSQ9NRZ9 838 aa35.25■■■■□ 3.23
CHCHD4-202ENST00000396914 GNAT2P19087 354 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms