RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MLLT1Q03111 559 aaPredicted RBP22.5■■□□□ 1.19
FXN-203ENST00000396366 PPIL2Q13356 520 aa22.5■■□□□ 1.19
FXN-203ENST00000396366 ZSCAN29Q8IWY8 852 aaPredicted RBP22.5■■□□□ 1.19
FXN-203ENST00000396366 EAF2Q96CJ1 260 aaPredicted RBP22.5■■□□□ 1.19
FXN-203ENST00000396366 CCDC8Q9H0W5 538 aaPredicted RBP22.5■■□□□ 1.19
FXN-203ENST00000396366 TRIM17Q9Y577 477 aa22.5■■□□□ 1.19
FXN-203ENST00000396366 PHF20L1A8MW92 1017 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 BTBD19C9JJ37 291 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 CETPP11597 493 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 PPATQ06203 517 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 SNAPC2Q13487 334 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 TAF1CQ15572 869 aaPredicted RBP22.49■■□□□ 1.19
FXN-203ENST00000396366 CCDC158Q5M9N0 1113 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 FBXO46Q6PJ61 603 aaPredicted RBP22.49■■□□□ 1.19
FXN-203ENST00000396366 OTOP1Q7RTM1 612 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.49■■□□□ 1.19
FXN-203ENST00000396366 LRP2BPQ9P2M1 347 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 DBNLQ9UJU6 430 aaKnown RBP22.49■■□□□ 1.19
FXN-203ENST00000396366 EXOC6BQ9Y2D4 811 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 DOCK2Q92608 1830 aa22.49■■□□□ 1.19
FXN-203ENST00000396366 MYO5AQ9Y4I1 1855 aaKnown RBP22.48■■□□□ 1.19
FXN-203ENST00000396366 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
FXN-203ENST00000396366 SP3Q02447 781 aa22.48■■□□□ 1.19
FXN-203ENST00000396366 TNRC18O15417 2968 aaPredicted RBP22.47■■□□□ 1.19
FXN-203ENST00000396366 LDHCP07864 332 aa22.47■■□□□ 1.19
FXN-203ENST00000396366 GSTO1P78417 241 aa22.47■■□□□ 1.19
FXN-203ENST00000396366 NOL9Q5SY16 702 aaKnown RBP22.47■■□□□ 1.19
FXN-203ENST00000396366 ZFYVE28Q9HCC9 887 aa22.47■■□□□ 1.19
FXN-203ENST00000396366 COG6Q9Y2V7 657 aa22.47■■□□□ 1.19
FXN-203ENST00000396366 ZAP70P43403 619 aa22.46■■□□□ 1.19
FXN-203ENST00000396366 MAP3K10Q02779 954 aa22.46■■□□□ 1.19
FXN-203ENST00000396366 ERO1AQ96HE7 468 aa22.46■■□□□ 1.19
FXN-203ENST00000396366 HTTP42858 3142 aa22.46■■□□□ 1.19
FXN-203ENST00000396366 MOGSQ13724 837 aa22.45■■□□□ 1.18
FXN-203ENST00000396366 ADGRA1Q86SQ6 560 aa22.45■■□□□ 1.18
FXN-203ENST00000396366 SH3RF3Q8TEJ3 882 aaPredicted RBP22.45■■□□□ 1.18
FXN-203ENST00000396366 PIH1D3Q9NQM4 214 aaKnown RBP22.45■■□□□ 1.18
FXN-203ENST00000396366 RCAN3Q9UKA8 241 aa22.45■■□□□ 1.18
FXN-203ENST00000396366 KCNH4Q9UQ05 1017 aa22.45■■□□□ 1.18
FXN-203ENST00000396366 NDUFB9Q9Y6M9 179 aa22.45■■□□□ 1.18
FXN-203ENST00000396366 FAM196BA6NMK8 535 aa22.44■■□□□ 1.18
FXN-203ENST00000396366 ZNF512BQ96KM6 892 aaPredicted RBP22.44■■□□□ 1.18
FXN-203ENST00000396366 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.44■■□□□ 1.18
FXN-203ENST00000396366 MS4A1P11836 297 aa22.43■■□□□ 1.18
FXN-203ENST00000396366 NAA16Q6N069 864 aaPredicted RBP22.43■■□□□ 1.18
FXN-203ENST00000396366 SIRT2Q8IXJ6 389 aa22.43■■□□□ 1.18
FXN-203ENST00000396366 SCYL3Q8IZE3 742 aa22.43■■□□□ 1.18
FXN-203ENST00000396366 EFCC1Q9HA90 598 aa22.43■■□□□ 1.18
FXN-203ENST00000396366 AATFQ9NY61 560 aaKnown RBP eCLIP22.43■■□□□ 1.18
FXN-203ENST00000396366 PTPN22Q9Y2R2 807 aa22.43■■□□□ 1.18
FXN-203ENST00000396366 ZHX2Q9Y6X8 837 aa22.43■■□□□ 1.18
FXN-203ENST00000396366 PTPRAP18433 802 aa22.42■■□□□ 1.18
FXN-203ENST00000396366 CCDC84Q86UT8 332 aaPredicted RBP22.42■■□□□ 1.18
FXN-203ENST00000396366 TEX11Q8IYF3 940 aa22.42■■□□□ 1.18
FXN-203ENST00000396366 IL1RAPL2Q9NP60 686 aa22.42■■□□□ 1.18
FXN-203ENST00000396366 ZBTB40Q9NUA8 1239 aa22.42■■□□□ 1.18
FXN-203ENST00000396366 ZSWIM8A7E2V4 1837 aa22.41■■□□□ 1.18
FXN-203ENST00000396366 APBB1O00213 710 aa22.41■■□□□ 1.18
FXN-203ENST00000396366 PDHXO00330 501 aa22.41■■□□□ 1.18
FXN-203ENST00000396366 TLR2O60603 784 aa22.41■■□□□ 1.18
FXN-203ENST00000396366 NPM3O75607 178 aaKnown RBP22.41■■□□□ 1.18
FXN-203ENST00000396366 ECM2O94769 699 aaPredicted RBP22.41■■□□□ 1.18
FXN-203ENST00000396366 C20orf194Q5TEA3 1177 aa22.41■■□□□ 1.18
FXN-203ENST00000396366 AACSQ86V21 672 aa22.41■■□□□ 1.18
FXN-203ENST00000396366 ARHGAP39Q9C0H5 1083 aa22.41■■□□□ 1.18
FXN-203ENST00000396366 OSBPL5Q9H0X9 879 aaPredicted RBP22.41■■□□□ 1.18
FXN-203ENST00000396366 ZCCHC17Q9NP64 241 aaKnown RBP22.41■■□□□ 1.18
FXN-203ENST00000396366 MAP4K4O95819 1239 aaPredicted RBP22.4■■□□□ 1.18
FXN-203ENST00000396366 GPAT2Q6NUI2 795 aa22.4■■□□□ 1.18
FXN-203ENST00000396366 ANKRD23Q86SG2 305 aa22.4■■□□□ 1.18
FXN-203ENST00000396366 PICK1Q9NRD5 415 aa22.4■■□□□ 1.18
FXN-203ENST00000396366 DDX19BQ9UMR2 479 aa22.4■■□□□ 1.18
FXN-203ENST00000396366 CENPFP49454 3210 aa22.4■■□□□ 1.18
FXN-203ENST00000396366 CTNND1O60716 968 aaKnown RBP22.39■■□□□ 1.17
FXN-203ENST00000396366 RRP1BQ14684 758 aaKnown RBP22.39■■□□□ 1.17
FXN-203ENST00000396366 ERC1Q8IUD2 1116 aa22.39■■□□□ 1.17
FXN-203ENST00000396366 RHPN1Q8TCX5 695 aa22.39■■□□□ 1.17
FXN-203ENST00000396366 NOL10Q9BSC4 688 aaKnown RBP22.39■■□□□ 1.17
FXN-203ENST00000396366 BCL11AQ9H165 835 aa22.39■■□□□ 1.17
FXN-203ENST00000396366 ANTXR1Q9H6X2 564 aa22.39■■□□□ 1.17
FXN-203ENST00000396366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.39■■□□□ 1.17
FXN-203ENST00000396366 CPA4Q9UI42 421 aa22.39■■□□□ 1.17
FXN-203ENST00000396366 AFG3L2Q9Y4W6 797 aa22.39■■□□□ 1.17
FXN-203ENST00000396366 MAST2Q6P0Q8 1798 aa22.39■■□□□ 1.17
FXN-203ENST00000396366 CXCL11O14625 94 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 TBC1D12O60347 775 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 BAG3O95817 575 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 PPP4CP60510 307 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 DYNLL1P63167 89 aaKnown RBP22.38■■□□□ 1.17
FXN-203ENST00000396366 RPAP2Q8IXW5 612 aaPredicted RBP22.38■■□□□ 1.17
FXN-203ENST00000396366 TGFBRAP1Q8WUH2 860 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 DOCK1Q14185 1865 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 CDK5RAP2Q96SN8 1893 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 PHIPQ8WWQ0 1821 aa22.38■■□□□ 1.17
FXN-203ENST00000396366 C17orf99Q6UX52 265 aa22.37■■□□□ 1.17
FXN-203ENST00000396366 MAPKAPK5Q8IW41 473 aa22.37■■□□□ 1.17
FXN-203ENST00000396366 A0A0G2JLL6 359 aaPredicted RBP22.36■■□□□ 1.17
FXN-203ENST00000396366 IDH1O75874 414 aaKnown RBP22.36■■□□□ 1.17
FXN-203ENST00000396366 CYP2C8P10632 490 aa22.36■■□□□ 1.17
FXN-203ENST00000396366 CYP7A1P22680 504 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms