RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 PDZD8Q8NEN9 1154 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 SPDL1Q96EA4 605 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 SCYL1Q96KG9 808 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 SLC4A1P02730 911 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
SIN3A-202ENST00000394947 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 RMDN2Q96LZ7 410 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 ATICP31939 592 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 AK2P54819 239 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 COG7P83436 770 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 KRT28Q7Z3Y7 464 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
SIN3A-202ENST00000394947 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 HMG20BQ9P0W2 317 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 BAIAP2L1Q9UHR4 511 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.66□□□□□ -0.22
SIN3A-202ENST00000394947 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 CUX1P39880 1505 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 CEP104O60308 925 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 VPS41P49754 854 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 RPS6KA2Q15349 733 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 SV2BQ7L1I2 683 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 MED10Q9BTT4 135 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 EFCC1Q9HA90 598 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 SFMBT1Q9UHJ3 866 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
SIN3A-202ENST00000394947 STAMQ92783 540 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 INPP5BP32019 993 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 CEBPAP49715 358 aaPredicted RBP13.65□□□□□ -0.22
SIN3A-202ENST00000394947 SCYL2Q6P3W7 929 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 CCDC94Q9BW85 323 aaPredicted RBP13.65□□□□□ -0.22
SIN3A-202ENST00000394947 CARD6Q9BX69 1037 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 CFTRP13569 1480 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 STRN3Q13033 797 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 PPFIA1Q13136 1202 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 RNF217Q8TC41 542 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
SIN3A-202ENST00000394947 NCOA2Q15596 1464 aa13.65□□□□□ -0.23
SIN3A-202ENST00000394947 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
SIN3A-202ENST00000394947 PEX19P40855 299 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 SLC8A3P57103 927 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 ELF2Q15723 593 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 IGSF22Q8N9C0 903 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 SUDS3Q9H7L9 328 aaPredicted RBP13.64□□□□□ -0.23
SIN3A-202ENST00000394947 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 I3L4J1 428 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 PARP1P09874 1014 aaKnown RBP13.64□□□□□ -0.23
SIN3A-202ENST00000394947 TFCP2Q12800 502 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 TCP10Q12799 353 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 BRD3Q15059 726 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 SMYD2Q9NRG4 433 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 STK10O94804 968 aaKnown RBP13.64□□□□□ -0.23
SIN3A-202ENST00000394947 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 SESTD1Q86VW0 696 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 ATP5DP30049 168 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 BLZF1Q9H2G9 400 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
SIN3A-202ENST00000394947 RBM28Q9NW13 759 aaKnown RBP13.64□□□□□ -0.23
SIN3A-202ENST00000394947 KIF21BO75037 1637 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 MUM1Q2TAK8 710 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 CCDC105Q8IYK2 499 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
SIN3A-202ENST00000394947 CTTNBP2NLQ9P2B4 639 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 TBC1D8BQ0IIM8 1120 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 ST7Q9NRC1 585 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 TFCP2L1Q9NZI6 479 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 FIS1Q9Y3D6 152 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 PTPRCP08575 1304 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 CD19P15391 556 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 POLD1P28340 1107 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 MYL10Q9BUA6 226 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 GOLGA6BA6NDN3 693 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 GCNT3O95395 438 aa13.63□□□□□ -0.23
SIN3A-202ENST00000394947 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
SIN3A-202ENST00000394947 RNF10Q8N5U6 811 aaKnown RBP13.63□□□□□ -0.23
SIN3A-202ENST00000394947 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 B4E1Z4 1266 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 KAZNQ674X7 775 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 IRAK4Q9NWZ3 460 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
SIN3A-202ENST00000394947 MGEA5O60502 916 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 SPAG1Q07617 926 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 NAPGQ99747 312 aaPredicted RBP13.62□□□□□ -0.23
SIN3A-202ENST00000394947 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms