RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MGAMO43451 1857 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 ENTPD3O75355 529 aa26.26■■□□□ 1.79
TRAF4-203ENST00000394925 CCDC102BQ68D86 513 aa26.26■■□□□ 1.79
TRAF4-203ENST00000394925 GADL1Q6ZQY3 521 aa26.26■■□□□ 1.79
TRAF4-203ENST00000394925 ZGPATQ8N5A5 531 aaKnown RBP26.26■■□□□ 1.79
TRAF4-203ENST00000394925 RNF208Q9H0X6 261 aa26.26■■□□□ 1.79
TRAF4-203ENST00000394925 GAKO14976 1311 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 A0A0G2JLL6 359 aaPredicted RBP26.25■■□□□ 1.79
TRAF4-203ENST00000394925 GJB1P08034 283 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 PTPRAP18433 802 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 GJA8P48165 433 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 UBXN2AP68543 259 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 CHRDL2Q6WN34 429 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 SH3BP5LQ7L8J4 393 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 FASTKD5Q7L8L6 764 aaKnown RBP26.25■■□□□ 1.79
TRAF4-203ENST00000394925 PRRT2Q7Z6L0 340 aaPredicted RBP26.25■■□□□ 1.79
TRAF4-203ENST00000394925 DZIP1Q86YF9 867 aaKnown RBP26.25■■□□□ 1.79
TRAF4-203ENST00000394925 ABCF2Q9UG63 623 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 NOB1Q9ULX3 412 aaKnown RBP26.25■■□□□ 1.79
TRAF4-203ENST00000394925 GABRQQ9UN88 632 aa26.25■■□□□ 1.79
TRAF4-203ENST00000394925 SLURP2P0DP57 97 aa26.24■■□□□ 1.79
TRAF4-203ENST00000394925 AFG3L2Q9Y4W6 797 aa26.24■■□□□ 1.79
TRAF4-203ENST00000394925 DDTLA6NHG4 134 aaPredicted RBP26.23■■□□□ 1.79
TRAF4-203ENST00000394925 TIMM10P62072 90 aa26.23■■□□□ 1.79
TRAF4-203ENST00000394925 RASGRF1Q13972 1273 aa26.23■■□□□ 1.79
TRAF4-203ENST00000394925 PICALMQ13492 652 aa26.22■■□□□ 1.79
TRAF4-203ENST00000394925 SLF2Q8IX21 1173 aa26.22■■□□□ 1.79
TRAF4-203ENST00000394925 SLAIN1Q8ND83 568 aa26.22■■□□□ 1.79
TRAF4-203ENST00000394925 COPRSQ9NQ92 184 aa26.22■■□□□ 1.79
TRAF4-203ENST00000394925 DDX4Q9NQI0 724 aaKnown RBP26.22■■□□□ 1.79
TRAF4-203ENST00000394925 HDAC5Q9UQL6 1122 aa26.22■■□□□ 1.79
TRAF4-203ENST00000394925 RFX7Q2KHR2 1363 aa26.21■■□□□ 1.79
TRAF4-203ENST00000394925 BTDP43251 543 aa26.21■■□□□ 1.79
TRAF4-203ENST00000394925 MAP3K10Q02779 954 aa26.21■■□□□ 1.79
TRAF4-203ENST00000394925 UBE2Q1Q7Z7E8 422 aa26.21■■□□□ 1.79
TRAF4-203ENST00000394925 PTPRFP10586 1907 aa26.21■■□□□ 1.79
TRAF4-203ENST00000394925 RANBP2P49792 3224 aaKnown RBP26.21■■□□□ 1.79
TRAF4-203ENST00000394925 SZT2Q5T011 3432 aa26.2■■□□□ 1.79
TRAF4-203ENST00000394925 ZBTB22O15209 634 aa26.2■■□□□ 1.78
TRAF4-203ENST00000394925 FAM163AQ96GL9 167 aaPredicted RBP26.2■■□□□ 1.78
TRAF4-203ENST00000394925 HTATIP2Q9BUP3 242 aa26.2■■□□□ 1.78
TRAF4-203ENST00000394925 API5Q9BZZ5 524 aaKnown RBP26.2■■□□□ 1.78
TRAF4-203ENST00000394925 UNC93B1Q9H1C4 597 aa26.2■■□□□ 1.78
TRAF4-203ENST00000394925 DOCK1Q14185 1865 aa26.19■■□□□ 1.78
TRAF4-203ENST00000394925 ADCY3O60266 1144 aa26.19■■□□□ 1.78
TRAF4-203ENST00000394925 CTNND1O60716 968 aaKnown RBP26.19■■□□□ 1.78
TRAF4-203ENST00000394925 SPTY2D1Q68D10 685 aaPredicted RBP26.19■■□□□ 1.78
TRAF4-203ENST00000394925 U2AF1L4Q8WU68 220 aaKnown RBP26.19■■□□□ 1.78
TRAF4-203ENST00000394925 MEIS3Q99687 375 aa26.19■■□□□ 1.78
TRAF4-203ENST00000394925 RBM27Q9P2N5 1060 aaKnown RBP26.19■■□□□ 1.78
TRAF4-203ENST00000394925 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.19■■□□□ 1.78
TRAF4-203ENST00000394925 SLC45A1Q9Y2W3 748 aa26.19■■□□□ 1.78
TRAF4-203ENST00000394925 PHIPQ8WWQ0 1821 aa26.18■■□□□ 1.78
TRAF4-203ENST00000394925 TRIM75PA6NK02 468 aa26.18■■□□□ 1.78
TRAF4-203ENST00000394925 ELNP15502 786 aa26.18■■□□□ 1.78
TRAF4-203ENST00000394925 FLT3LGP49771 235 aa26.18■■□□□ 1.78
TRAF4-203ENST00000394925 CCDC84Q86UT8 332 aaPredicted RBP26.18■■□□□ 1.78
TRAF4-203ENST00000394925 SMCR8Q8TEV9 937 aaPredicted RBP26.18■■□□□ 1.78
TRAF4-203ENST00000394925 MROH7-TTC4A0A0A0MT08 1334 aa26.17■■□□□ 1.78
TRAF4-203ENST00000394925 PDS5AQ29RF7 1337 aaKnown RBP26.17■■□□□ 1.78
TRAF4-203ENST00000394925 A0A1B0GUL7 405 aa26.17■■□□□ 1.78
TRAF4-203ENST00000394925 TNPO2O14787 897 aaKnown RBP26.17■■□□□ 1.78
TRAF4-203ENST00000394925 TRMT2AQ8IZ69 625 aaKnown RBP26.17■■□□□ 1.78
TRAF4-203ENST00000394925 XAGE2Q96GT9 111 aa26.17■■□□□ 1.78
TRAF4-203ENST00000394925 FARP2O94887 1054 aaPredicted RBP26.16■■□□□ 1.78
TRAF4-203ENST00000394925 SGPL1O95470 568 aa26.16■■□□□ 1.78
TRAF4-203ENST00000394925 MECOMQ03112 1051 aa26.16■■□□□ 1.78
TRAF4-203ENST00000394925 TFCP2Q12800 502 aa26.16■■□□□ 1.78
TRAF4-203ENST00000394925 ERICH6Q7L0X2 663 aa26.16■■□□□ 1.78
TRAF4-203ENST00000394925 DOCK3Q8IZD9 2030 aa26.15■■□□□ 1.78
TRAF4-203ENST00000394925 AKAP2Q9Y2D5 859 aa26.15■■□□□ 1.78
TRAF4-203ENST00000394925 GPR75-ASB3A0A0A6YYF3 556 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 FAM196BA6NMK8 535 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 INHAP05111 366 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 CT47B1P0C2W7 299 aaPredicted RBP26.14■■□□□ 1.78
TRAF4-203ENST00000394925 RHBDL3P58872 404 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 MVPQ14764 893 aaKnown RBP26.14■■□□□ 1.78
TRAF4-203ENST00000394925 ANKRD13CQ8N6S4 541 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 TAOK2Q9UL54 1235 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 AGTPBP1Q9UPW5 1226 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 NR2E3Q9Y5X4 410 aa26.14■■□□□ 1.78
TRAF4-203ENST00000394925 SRGAP3O43295 1099 aa26.13■■□□□ 1.77
TRAF4-203ENST00000394925 IRF5Q13568 498 aa26.13■■□□□ 1.77
TRAF4-203ENST00000394925 TREML2Q5T2D2 321 aa26.13■■□□□ 1.77
TRAF4-203ENST00000394925 PXYLP1Q8TE99 480 aa26.13■■□□□ 1.77
TRAF4-203ENST00000394925 ZNF384Q8TF68 577 aa26.13■■□□□ 1.77
TRAF4-203ENST00000394925 NEUROD6Q96NK8 337 aa26.13■■□□□ 1.77
TRAF4-203ENST00000394925 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.13■■□□□ 1.77
TRAF4-203ENST00000394925 TBC1D12O60347 775 aa26.12■■□□□ 1.77
TRAF4-203ENST00000394925 TFRCP02786 760 aaKnown RBP26.12■■□□□ 1.77
TRAF4-203ENST00000394925 DEFB118Q96PH6 123 aa26.12■■□□□ 1.77
TRAF4-203ENST00000394925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.12■■□□□ 1.77
TRAF4-203ENST00000394925 COA7Q96BR5 231 aa26.11■■□□□ 1.77
TRAF4-203ENST00000394925 HMG20BQ9P0W2 317 aa26.11■■□□□ 1.77
TRAF4-203ENST00000394925 PNMA3Q9UL41 463 aa26.11■■□□□ 1.77
TRAF4-203ENST00000394925 ZBTB7BO15156 539 aaPredicted RBP26.1■■□□□ 1.77
TRAF4-203ENST00000394925 GNAI3P08754 354 aa26.1■■□□□ 1.77
TRAF4-203ENST00000394925 SPP2Q13103 211 aa26.1■■□□□ 1.77
TRAF4-203ENST00000394925 PI16Q6UXB8 463 aa26.1■■□□□ 1.77
TRAF4-203ENST00000394925 TBC1D9Q6ZT07 1266 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms