RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 VPS37DQ86XT2 251 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 CCDC94Q9BW85 323 aaPredicted RBP15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 XPO4Q9C0E2 1151 aaKnown RBP15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 ARMT1Q9H993 441 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 POLR3EQ9NVU0 708 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 IFNKQ9P0W0 207 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 ANGEL1Q9UNK9 670 aaKnown RBP15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 IQSEC3Q9UPP2 1182 aaPredicted RBP15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 SLC5A1P13866 664 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 ARID4AP29374 1257 aaPredicted RBP15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 IGHMBP2P38935 993 aaKnown RBP15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 SYNE3Q6ZMZ3 975 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 FNBP4Q8N3X1 1017 aaPredicted RBP15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 FOXN1O15353 648 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 SMC2O95347 1197 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 LMOD1P29536 600 aaPredicted RBP15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 GOLGA8FQ08AF8 430 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 GOLGA8DPQ0D2H9 430 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 RASGRF1Q13972 1273 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 SHC4Q6S5L8 630 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 ZNF512BQ96KM6 892 aaPredicted RBP15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 SRP68Q9UHB9 627 aaKnown RBP15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 A0A1W2PQ27 194 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 A0A1W2PQ64 194 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 A0A1W2PQD8 194 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 CTIFO43310 598 aaKnown RBP15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 SLC3A2P08195 630 aaKnown RBP15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 NCAPHQ15003 741 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 HSP90AA4PQ58FG1 418 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 ATL3Q6DD88 541 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 MAGEB6Q8N7X4 407 aa15.63■□□□□ 0.09
GTF2F1-201ENST00000394456 MBD4O95243 580 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 BCAMP50895 628 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 GRIN1Q05586 938 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 PNOCQ13519 176 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 TTF1Q15361 905 aaPredicted RBP15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 RRP12Q5JTH9 1297 aaKnown RBP15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 SPATA5Q8NB90 893 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 KCNG4Q8TDN1 519 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 IGDCC4Q8TDY8 1250 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 STRBPQ96SI9 672 aaKnown RBP15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 ZMYM6O95789 1325 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 YEATS4O95619 227 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 UQCRFS1P1P0C7P4 283 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 CHRNDQ07001 517 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 TRDNQ13061 729 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 TBC1D9BQ66K14 1250 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 NFXL1Q6ZNB6 911 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 TMC6Q7Z403 805 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 PDCL2Q8N4E4 241 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 CCDC24Q8N4L8 307 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 DPF2Q92785 391 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 LY9Q9HBG7 655 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 ZSWIM5Q9P217 1185 aa15.62■□□□□ 0.09
GTF2F1-201ENST00000394456 NTRK3Q16288 839 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 CEP135Q66GS9 1140 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 ARMCX5Q6P1M9 558 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 ANKRD7Q92527 254 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 HSD3B7Q9H2F3 369 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 KCNJ14Q9UNX9 436 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 GNPATO15228 680 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 DHX16O60231 1041 aaKnown RBP15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 GTF2E1P29083 439 aaPredicted RBP15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 AMIGO3Q86WK7 504 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 MIGA1Q8NAN2 632 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 AIDAQ96BJ3 306 aa15.61■□□□□ 0.09
GTF2F1-201ENST00000394456 CAVIN2O95810 425 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 PTPAQ15257 358 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 TMEM67Q5HYA8 995 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 CLEC4GQ6UXB4 293 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 BRAPQ7Z569 592 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 SLC26A6Q9BXS9 759 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 C4BP0C0L5 1744 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 GOLGA8AA7E2F4 631 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 SLC39A14Q15043 492 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 FOXP4Q8IVH2 680 aaPredicted RBP15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 TOMM22Q9NS69 142 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 CNTNAP4Q9C0A0 1308 aa15.6■□□□□ 0.09
GTF2F1-201ENST00000394456 SMTNL1A8MU46 457 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 RBM6P78332 1123 aaKnown RBP15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 MEX3CQ5U5Q3 659 aaKnown RBP15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 MTERF4Q7Z6M4 381 aaKnown RBP15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 IFNL3Q8IZI9 196 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 LCORLQ8N3X6 602 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 MAP3K14Q99558 947 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 CCNL1Q9UK58 526 aaPredicted RBP15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 ZBTB43O43298 467 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 CMA1P23946 247 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 LRRN4CLQ8ND94 238 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 DOCK2Q92608 1830 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 IFIT3O14879 490 aaKnown RBP15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 IGSF3O75054 1194 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 SYKP43405 635 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 NLRP12P59046 1061 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 GNL2Q13823 731 aaKnown RBP15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 UBE3CQ15386 1083 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 LONRF3Q496Y0 759 aa15.59■□□□□ 0.09
GTF2F1-201ENST00000394456 RTL9Q8NET4 1388 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms