RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 VWA3AA6NCI4 1184 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 SLC1A4P43007 532 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 DNA2P51530 1060 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 PRPF4BQ13523 1007 aaKnown RBP16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 TNFAIP1Q13829 316 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 CNNM4Q6P4Q7 775 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
PPARGC1B-203ENST00000394320 SPECC1Q5M775 1068 aa16.27■□□□□ 0.19
PPARGC1B-203ENST00000394320 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.19
PPARGC1B-203ENST00000394320 TEKT1Q969V4 418 aa16.27■□□□□ 0.19
PPARGC1B-203ENST00000394320 SYNCQ9H7C4 482 aa16.27■□□□□ 0.19
PPARGC1B-203ENST00000394320 ATG3Q9NT62 314 aa16.27■□□□□ 0.19
PPARGC1B-203ENST00000394320 ADCY7P51828 1080 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 BACH1O14867 736 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 CPA1P15085 419 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 TRIM14Q14142 442 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 SMC1AQ14683 1233 aaKnown RBP16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 CNKSR1Q969H4 720 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 ADGRL3Q9HAR2 1447 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 DLGAP5Q15398 846 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 ZNF174Q15697 407 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 LRRC45Q96CN5 670 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 KCNH3Q9ULD8 1083 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 E7EWF7 191 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 GJA3Q9Y6H8 435 aa16.26■□□□□ 0.19
PPARGC1B-203ENST00000394320 EAF2Q96CJ1 260 aaPredicted RBP16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 LUC7L2Q9Y383 392 aaKnown RBP16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 PRR36Q9H6K5 1346 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 CTAGE15A4D2H0 777 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 CTAGE8P0CG41 777 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 UBE3CQ15386 1083 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 CTAGE6Q86UF2 777 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 CTAGE4Q8IX94 777 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 KCNG1Q9UIX4 513 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 THRAP3Q9Y2W1 955 aaKnown RBP16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 ZKSCAN5Q9Y2L8 839 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 TUBBP07437 444 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 CCT6AP40227 531 aaKnown RBP16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 PPARAQ07869 468 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 MLKLQ8NB16 471 aa16.25■□□□□ 0.19
PPARGC1B-203ENST00000394320 ZBED4O75132 1171 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 VWA3BQ502W6 1294 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 BRDTQ58F21 947 aaPredicted RBP16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 SMTNP53814 917 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 UBXN1Q04323 297 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 FAM196AQ6ZSG2 479 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 CEP112Q8N8E3 955 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 RASAL2Q9UJF2 1139 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 CEP83Q9Y592 693 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 ATP10DQ9P241 1426 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 NOLC1Q14978 699 aaKnown RBP eCLIP16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 MFSD14BQ5SR56 506 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 KRT40Q6A162 431 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 PIK3AP1Q6ZUJ8 805 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 CLSTN2Q9H4D0 955 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 ERVV-1B6SEH8 477 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 PRDM1O75626 825 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 PDE6AP16499 860 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 CCDC113Q9H0I3 377 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 FRMD4BQ9Y2L6 1034 aa16.24■□□□□ 0.19
PPARGC1B-203ENST00000394320 TSPOAP1O95153 1857 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 FSD2A1L4K1 749 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 DYNC1I1O14576 645 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 TFAP4Q01664 338 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 OSBPL3Q9H4L5 887 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 LEMD3Q9Y2U8 911 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 PDE8BO95263 885 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 BMS1Q14692 1282 aaKnown RBP16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 EXOC7Q9UPT5 735 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 ZNF521Q96K83 1311 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 PPIP5K2O43314 1243 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 CHURC1Q8WUH1 139 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
PPARGC1B-203ENST00000394320 EPB41P11171 864 aaKnown RBP16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 MAPKAPK5Q8IW41 473 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 CTAGE9A4FU28 777 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 GTF3C6Q969F1 213 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 TGFBRAP1Q8WUH2 860 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 IFNKQ9P0W0 207 aa16.22■□□□□ 0.19
PPARGC1B-203ENST00000394320 NT5C2P49902 561 aa16.21■□□□□ 0.19
PPARGC1B-203ENST00000394320 GALNT17Q6IS24 598 aa16.21■□□□□ 0.19
PPARGC1B-203ENST00000394320 MICALCLQ6ZW33 695 aa16.21■□□□□ 0.19
PPARGC1B-203ENST00000394320 FAM107BQ9H098 131 aa16.21■□□□□ 0.19
PPARGC1B-203ENST00000394320 NCOA5Q9HCD5 579 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms