RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 CHRNA2Q15822 529 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 CYP26C1Q6V0L0 522 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 IFT20Q8IY31 132 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 HVCN1Q96D96 273 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 MGEA5O60502 916 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 OPHN1O60890 802 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 MYCLP12524 364 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 TUBB4BP68371 445 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 IL1RL1Q01638 556 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 CNGA4Q8IV77 575 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 CXorf38Q8TB03 319 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 XAGE3Q8WTP9 111 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 RBSNQ9H1K0 784 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 GJA3Q9Y6H8 435 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 HECW1Q76N89 1606 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 PTPDC1A2A3K4 754 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 STMN1P16949 149 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 AK2P54819 239 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 NCAPH2Q6IBW4 605 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 ANKRD42Q8N9B4 389 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 IGSF22Q8N9C0 903 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 MRPL46Q9H2W6 279 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 ZRANB1Q9UGI0 708 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 ZKSCAN5Q9Y2L8 839 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 EPRSP07814 1512 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 GIGYF1O75420 1035 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 BAG2O95816 211 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 SMTNP53814 917 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 RILPL1Q5EBL4 403 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 HELBQ8NG08 1087 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 RBM28Q9NW13 759 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 CCDC141Q6ZP82 1450 aa6.33□□□□□ -1.4
GAPVD1-206ENST00000394104 SPDYE16A6NNV3 312 aaPredicted RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SETSIPP0DME0 302 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 GNA11P29992 359 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 RPS6KA2Q15349 733 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 MUM1Q2TAK8 710 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SPDYE2Q495Y8 402 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PNMA8AQ86V59 439 aaPredicted RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 FCHSD1Q86WN1 690 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 CCDC125Q86Z20 511 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 GABPB2Q8TAK5 448 aaPredicted RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 UBE2Q2Q8WVN8 375 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 DNAJC5BQ9UF47 199 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PHF8Q9UPP1 1060 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 XRCC6P12956 609 aaKnown RBP eCLIP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 KRT15P19012 456 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 ZYXQ15942 572 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PDCD7Q8N8D1 485 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 GBP5Q96PP8 586 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 MEIS3Q99687 375 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 VPS37BQ9H9H4 285 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SEPT10Q9P0V9 454 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 DHX29Q7Z478 1369 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 ELP1O95163 1332 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 ARHGAP42A6NI28 874 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PPP1R12AO14974 1030 aaPredicted RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 RNF113AO15541 343 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SLC39A6Q13433 755 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 RUFY3Q7L099 469 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 ARHGAP24Q8N264 748 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SCYL1Q96KG9 808 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 NLRP3Q96P20 1036 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 ZNF408Q9H9D4 720 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PLCB1Q9NQ66 1216 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SPECC1L-ADORA2AF8WAN1 911 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 TUBB4AP04350 444 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 VWA3BQ502W6 1294 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 NCAPGQ9BPX3 1015 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 MED10Q9BTT4 135 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SYNRGQ9UMZ2 1314 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 CEP104O60308 925 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 GNAT2P19087 354 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 CASP2P42575 452 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 SLC12A2P55011 1212 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 ITKQ08881 620 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 TBC1D8BQ0IIM8 1120 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 C4orf50Q6ZRC1 276 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PIK3AP1Q6ZUJ8 805 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 POTEDQ86YR6 584 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 MORC4Q8TE76 937 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 NOX5Q96PH1 765 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PRPF6O94906 941 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 TFCP2Q12800 502 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 CNNM4Q6P4Q7 775 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 DCUN1D2Q6PH85 259 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 COPS6Q7L5N1 327 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 IQUBQ8NA54 791 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 PDZD8Q8NEN9 1154 aa6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 TPX2Q9ULW0 747 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-206ENST00000394104 NOP56O00567 594 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 LDHBP07195 334 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 KRT3P12035 628 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 DENND2CQ68D51 928 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 LCA5Q86VQ0 697 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 CCDC105Q8IYK2 499 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 SECISBP2LQ93073 1101 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms