RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MICU3Q86XE3 530 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 LINC00301Q8NCQ3 95 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 ARMT1Q9H993 441 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 CBX8Q9HC52 389 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 EPB41L4AQ9HCS5 686 aaPredicted RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 BSDC1Q9NW68 430 aaPredicted RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 DENND2AQ9ULE3 1009 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 SLC4A4Q9Y6R1 1079 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 PDS5AQ29RF7 1337 aaKnown RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 GSG1L2A8MUP6 293 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 SPTLC2O15270 562 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 IGSF3O75054 1194 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 PCP11498 1178 aaKnown RBP8.35□□□□□ -1.07
SMAD1-202ENST00000394092 IARSP41252 1262 aaKnown RBP8.35□□□□□ -1.07
SMAD1-202ENST00000394092 BCAMP50895 628 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 PPP2R5BQ15173 497 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 MAMSTRQ6ZN01 415 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
SMAD1-202ENST00000394092 VPS37DQ86XT2 251 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 LINC00116Q8NCU8 138 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 IGDCC4Q8TDY8 1250 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 PIBF1Q8WXW3 757 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 PHF12Q96QT6 1004 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 ALG1Q9BT22 464 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 LY9Q9HBG7 655 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 DUOX1Q9NRD9 1551 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 TAF1P21675 1872 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 BAZ2AQ9UIF9 1905 aaKnown RBP8.35□□□□□ -1.07
SMAD1-202ENST00000394092 MYH2Q9UKX2 1941 aa8.35□□□□□ -1.07
SMAD1-202ENST00000394092 MAGEB6P1A0A0J9YX57 407 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 CDC25BP30305 580 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 SSRP1Q08945 709 aaKnown RBP8.34□□□□□ -1.07
SMAD1-202ENST00000394092 WTAPQ15007 396 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMAD1-202ENST00000394092 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
SMAD1-202ENST00000394092 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 SLC10A5Q5PT55 438 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 ANO1Q5XXA6 986 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 LUZP1Q86V48 1076 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 CEP57L1Q8IYX8 460 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 LCORLQ8N3X6 602 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 ENGASEQ8NFI3 743 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 UBAC1Q9BSL1 405 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 ANKRD2Q9GZV1 360 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 DNAJC25Q9H1X3 360 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 TOMM22Q9NS69 142 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 RAI14Q9P0K7 980 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.34□□□□□ -1.07
SMAD1-202ENST00000394092 NARFQ9UHQ1 456 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 PCDHA7Q9UN72 937 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 SBF2Q86WG5 1849 aa8.34□□□□□ -1.07
SMAD1-202ENST00000394092 BECN2A8MW95 431 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 PPP6R2O75170 966 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 ZPR1O75312 459 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 IFNAR1P17181 557 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 CYP7A1P22680 504 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 NT5C2P49902 561 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 PPARAQ07869 468 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 SNW1Q13573 536 aaKnown RBP8.34□□□□□ -1.08
SMAD1-202ENST00000394092 RTN1Q16799 776 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 KRT40Q6A162 431 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 SARM1Q6SZW1 724 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.08
SMAD1-202ENST00000394092 ESR2Q92731 530 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 FAM163AQ96GL9 167 aaPredicted RBP8.34□□□□□ -1.08
SMAD1-202ENST00000394092 TRIM5Q9C035 493 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 FTOQ9C0B1 505 aaKnown RBP eCLIP8.34□□□□□ -1.08
SMAD1-202ENST00000394092 GOLPH3LQ9H4A5 285 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 ABCF2Q9UG63 623 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 METRNQ9UJH8 293 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 ANAPC4Q9UJX5 808 aa8.34□□□□□ -1.08
SMAD1-202ENST00000394092 KCNQ2O43526 872 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 PPFIA3O75145 1194 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 RPS6KA4O75676 772 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 FMNL1O95466 1100 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-202ENST00000394092 POLR3DP05423 398 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-202ENST00000394092 CMA1P23946 247 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 ZNF75DP51815 510 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 TPM4P67936 248 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 PIP4K2BP78356 416 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 SLC39A14Q15043 492 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 OTUD7BQ6GQQ9 843 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 RAB11FIP4Q86YS3 637 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 NGLY1Q96IV0 654 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 TIGD1Q96MW7 591 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 SDF4Q9BRK5 362 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 BRIP1Q9BX63 1249 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 ZSWIM5Q9P217 1185 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 CLIC4Q9Y696 253 aa8.33□□□□□ -1.08
SMAD1-202ENST00000394092 COL1A1P02452 1464 aaPredicted RBP8.32□□□□□ -1.08
SMAD1-202ENST00000394092 COL4A1P02462 1669 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 KIF28PB7ZC32 967 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms