RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 CTDNEP1O95476 244 aa23.14■■□□□ 1.3
RAB5C-202ENST00000393860 ZSCAN22P10073 491 aaPredicted RBP23.14■■□□□ 1.3
RAB5C-202ENST00000393860 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.3
RAB5C-202ENST00000393860 ATP8A2Q9NTI2 1148 aa23.14■■□□□ 1.3
RAB5C-202ENST00000393860 PRDM1O75626 825 aa23.14■■□□□ 1.29
RAB5C-202ENST00000393860 BAG3O95817 575 aa23.14■■□□□ 1.29
RAB5C-202ENST00000393860 USP17L8P0C7I0 530 aa23.14■■□□□ 1.29
RAB5C-202ENST00000393860 TMEM67Q5HYA8 995 aa23.14■■□□□ 1.29
RAB5C-202ENST00000393860 LARP1BQ659C4 914 aaKnown RBP23.14■■□□□ 1.29
RAB5C-202ENST00000393860 RNF41Q9H4P4 317 aaPredicted RBP23.14■■□□□ 1.29
RAB5C-202ENST00000393860 NAV1Q8NEY1 1877 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 IFIT3O14879 490 aaKnown RBP23.13■■□□□ 1.29
RAB5C-202ENST00000393860 EVCP57679 992 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 AOC3Q16853 763 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 NSUN7Q8NE18 718 aaKnown RBP23.13■■□□□ 1.29
RAB5C-202ENST00000393860 IGDCC4Q8TDY8 1250 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 TGFBRAP1Q8WUH2 860 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 MCM9Q9NXL9 1143 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 HPS5Q9UPZ3 1129 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 MTMR6Q9Y217 621 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 ADAMTSL1Q8N6G6 1762 aa23.13■■□□□ 1.29
RAB5C-202ENST00000393860 CDK5RAP2Q96SN8 1893 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 RXRAP19793 462 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 FOSBP53539 338 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 R3HDM1Q15032 1099 aaKnown RBP23.12■■□□□ 1.29
RAB5C-202ENST00000393860 TMEM87BQ96K49 555 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 LY9Q9HBG7 655 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 SNED1Q8TER0 1413 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 PTPDC1A2A3K4 754 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 PPP4CP60510 307 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 NFXL1Q6ZNB6 911 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 TTLL6Q8N841 843 aa23.12■■□□□ 1.29
RAB5C-202ENST00000393860 ECE2O60344 883 aa23.11■■□□□ 1.29
RAB5C-202ENST00000393860 IGSF3O75054 1194 aa23.11■■□□□ 1.29
RAB5C-202ENST00000393860 KCNA3P22001 575 aa23.11■■□□□ 1.29
RAB5C-202ENST00000393860 MAPKAPK5Q8IW41 473 aa23.11■■□□□ 1.29
RAB5C-202ENST00000393860 MYL10Q9BUA6 226 aa23.11■■□□□ 1.29
RAB5C-202ENST00000393860 SCN9AQ15858 1988 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 GPR75-ASB3A0A0A6YYF3 556 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 CDC37L1Q7L3B6 337 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 SMARCC2Q8TAQ2 1214 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 ARPP21Q9UBL0 812 aaPredicted RBP23.1■■□□□ 1.29
RAB5C-202ENST00000393860 SAP30BPQ9UHR5 308 aaKnown RBP23.1■■□□□ 1.29
RAB5C-202ENST00000393860 TTF2Q9UNY4 1162 aaKnown RBP23.1■■□□□ 1.29
RAB5C-202ENST00000393860 GOLGA6L22H0YM25 854 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 TRAK2O60296 914 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 F13A1P00488 732 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 SCNN1DP51172 638 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 CCDC144CPQ8IYA2 1237 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 TEX11Q8IYF3 940 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 LLPHQ9BRT6 129 aaKnown RBP23.1■■□□□ 1.29
RAB5C-202ENST00000393860 DAGLAQ9Y4D2 1042 aa23.1■■□□□ 1.29
RAB5C-202ENST00000393860 KIF13BQ9NQT8 1826 aa23.09■■□□□ 1.29
RAB5C-202ENST00000393860 GAKO14976 1311 aa23.09■■□□□ 1.29
RAB5C-202ENST00000393860 RANBP6O60518 1105 aaKnown RBP23.09■■□□□ 1.29
RAB5C-202ENST00000393860 MKRN1Q9UHC7 482 aaKnown RBP23.09■■□□□ 1.29
RAB5C-202ENST00000393860 APOA5Q6Q788 366 aa23.08■■□□□ 1.29
RAB5C-202ENST00000393860 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
RAB5C-202ENST00000393860 MICU3Q86XE3 530 aa23.08■■□□□ 1.29
RAB5C-202ENST00000393860 SLF2Q8IX21 1173 aa23.08■■□□□ 1.29
RAB5C-202ENST00000393860 FAM184AQ8NB25 1140 aa23.08■■□□□ 1.29
RAB5C-202ENST00000393860 ESR2Q92731 530 aa23.08■■□□□ 1.29
RAB5C-202ENST00000393860 GOLGB1Q14789 3259 aaKnown RBP23.08■■□□□ 1.29
RAB5C-202ENST00000393860 SBK1Q52WX2 424 aa23.08■■□□□ 1.28
RAB5C-202ENST00000393860 FERMT3Q86UX7 667 aa23.08■■□□□ 1.28
RAB5C-202ENST00000393860 RHBDL3P58872 404 aa23.07■■□□□ 1.28
RAB5C-202ENST00000393860 WTAPQ15007 396 aa23.07■■□□□ 1.28
RAB5C-202ENST00000393860 DYNLL2Q96FJ2 89 aa23.07■■□□□ 1.28
RAB5C-202ENST00000393860 PPP1R1BQ9UD71 204 aaPredicted RBP23.07■■□□□ 1.28
RAB5C-202ENST00000393860 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.07■■□□□ 1.28
RAB5C-202ENST00000393860 ZNF646O15015 1829 aaPredicted RBP23.07■■□□□ 1.28
RAB5C-202ENST00000393860 CCDC69A6NI79 296 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 PPIP5K2O43314 1243 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 PDCP20941 246 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 METAP2P50579 478 aaKnown RBP eCLIP23.06■■□□□ 1.28
RAB5C-202ENST00000393860 CC2D2BQ6DHV5 1058 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 FAM163AQ96GL9 167 aaPredicted RBP23.06■■□□□ 1.28
RAB5C-202ENST00000393860 UBAC1Q9BSL1 405 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 MTFR1LQ9H019 292 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 PSDA5PKW4 1024 aaPredicted RBP23.06■■□□□ 1.28
RAB5C-202ENST00000393860 PRPF40AO75400 957 aaKnown RBP23.06■■□□□ 1.28
RAB5C-202ENST00000393860 POLD1P28340 1107 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 KIAA2012Q0VF49 1180 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 SART3Q15020 963 aaKnown RBP23.06■■□□□ 1.28
RAB5C-202ENST00000393860 CCDC93Q567U6 631 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 FAM47AQ5JRC9 791 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 C12orf60Q5U649 245 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 KLHL34Q8N239 644 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 GDPD2Q9HCC8 539 aa23.06■■□□□ 1.28
RAB5C-202ENST00000393860 TNKSO95271 1327 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 ERICH2A1L162 156 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 ZBTB43O43298 467 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 LIFRP42702 1097 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 SGMS1Q86VZ5 419 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 GZF1Q9H116 711 aaPredicted RBP23.05■■□□□ 1.28
RAB5C-202ENST00000393860 LMBRD1Q9NUN5 540 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 SUGT1Q9Y2Z0 365 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 SLC12A7Q9Y666 1083 aa23.05■■□□□ 1.28
RAB5C-202ENST00000393860 GOLGA8AA7E2F4 631 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 SLC3A2P08195 630 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms