RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 LIFRP42702 1097 aa12.83□□□□□ -0.36
CASP3-202ENST00000393585 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
CASP3-202ENST00000393585 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
CASP3-202ENST00000393585 PRDM1O75626 825 aa12.83□□□□□ -0.36
CASP3-202ENST00000393585 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
CASP3-202ENST00000393585 DZIP1Q86YF9 867 aaKnown RBP12.83□□□□□ -0.36
CASP3-202ENST00000393585 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
CASP3-202ENST00000393585 PGBD1Q96JS3 809 aa12.83□□□□□ -0.36
CASP3-202ENST00000393585 TSPY26PQ9H489 355 aa12.83□□□□□ -0.36
CASP3-202ENST00000393585 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
CASP3-202ENST00000393585 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.36
CASP3-202ENST00000393585 MYH15Q9Y2K3 1946 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 GOLGA6L4A6NEF3 574 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 GRIK5Q16478 980 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 GIMAP6Q6P9H5 292 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 COL23A1Q86Y22 540 aaPredicted RBP12.82□□□□□ -0.36
CASP3-202ENST00000393585 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 FAM217BQ9NTX9 383 aaPredicted RBP12.82□□□□□ -0.36
CASP3-202ENST00000393585 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 USP17L12C9JPN9 530 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 USP17L21D6R901 530 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 UBE2Q2LH0YL09 131 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 WTAPQ15007 396 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 SLC4A8Q2Y0W8 1093 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 CTR9Q6PD62 1173 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 FBXO18Q8NFZ0 1043 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 TDRD7Q8NHU6 1098 aaKnown RBP12.82□□□□□ -0.36
CASP3-202ENST00000393585 MYH2Q9UKX2 1941 aa12.82□□□□□ -0.36
CASP3-202ENST00000393585 RANBP6O60518 1105 aaKnown RBP12.81□□□□□ -0.36
CASP3-202ENST00000393585 SART3Q15020 963 aaKnown RBP12.81□□□□□ -0.36
CASP3-202ENST00000393585 NTRK3Q16288 839 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 ZNF804AQ7Z570 1209 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 DCP1AQ9NPI6 582 aaPredicted RBP12.81□□□□□ -0.36
CASP3-202ENST00000393585 ANAPC4Q9UJX5 808 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 CFAP45Q9UL16 551 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 ERICH2A1L162 156 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
CASP3-202ENST00000393585 LDHBP07195 334 aaKnown RBP12.81□□□□□ -0.36
CASP3-202ENST00000393585 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 BICD2Q8TD16 824 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 CRNKL1Q9BZJ0 848 aaKnown RBP12.81□□□□□ -0.36
CASP3-202ENST00000393585 GGA1Q9UJY5 639 aa12.81□□□□□ -0.36
CASP3-202ENST00000393585 PLSCR1O15162 318 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 ESR2Q92731 530 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 UBAC1Q9BSL1 405 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 ALG1Q9BT22 464 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 POLLQ9UGP5 575 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 TNKSO95271 1327 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 KIF28PB7ZC32 967 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 CYP2D6P10635 497 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 CAMK4Q16566 473 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
CASP3-202ENST00000393585 CPLX2Q6PUV4 134 aaKnown RBP12.8□□□□□ -0.36
CASP3-202ENST00000393585 SYNE3Q6ZMZ3 975 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 CD209Q9NNX6 404 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 DACT1Q9NYF0 836 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 MAST2Q6P0Q8 1798 aa12.8□□□□□ -0.36
CASP3-202ENST00000393585 BBOX1O75936 387 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 CDKL5O76039 1030 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 ATP2B4P23634 1241 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 HOXA10P31260 410 aaPredicted RBP12.79□□□□□ -0.36
CASP3-202ENST00000393585 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
CASP3-202ENST00000393585 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
CASP3-202ENST00000393585 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 SLC26A6Q9BXS9 759 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 NR1I2O75469 434 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
CASP3-202ENST00000393585 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
CASP3-202ENST00000393585 C6orf229H3BNL8 230 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 SEC23AQ15436 765 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 ZNF654Q8IZM8 581 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 TBC1D16Q8TBP0 767 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
CASP3-202ENST00000393585 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
CASP3-202ENST00000393585 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
CASP3-202ENST00000393585 USP17L8P0C7I0 530 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 KIF23Q02241 960 aaPredicted RBP12.78□□□□□ -0.36
CASP3-202ENST00000393585 RTN1Q16799 776 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 KRT40Q6A162 431 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
CASP3-202ENST00000393585 NLGN1Q8N2Q7 840 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 ENAHQ8N8S7 591 aaPredicted RBP12.78□□□□□ -0.36
CASP3-202ENST00000393585 NUP62CLQ9H1M0 184 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 ATP8A2Q9NTI2 1148 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
CASP3-202ENST00000393585 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.36
CASP3-202ENST00000393585 RXRBP28702 533 aa12.77□□□□□ -0.36
CASP3-202ENST00000393585 GUCY1A2P33402 732 aa12.77□□□□□ -0.36
CASP3-202ENST00000393585 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.36
CASP3-202ENST00000393585 SH3RF3Q8TEJ3 882 aaPredicted RBP12.77□□□□□ -0.36
CASP3-202ENST00000393585 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms