RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 ZBTB10Q96DT7 871 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 C8orf76Q96K31 380 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 MTA3Q9BTC8 594 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 AATFQ9NY61 560 aaKnown RBP eCLIP3.64□□□□□ -1.83
PHF3-202ENST00000393387 LARSQ9P2J5 1176 aaKnown RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 ATP6V0A2Q9Y487 856 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 TMOD1P28289 359 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 MARCKSP29966 332 aaPredicted RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 IFNAR2P48551 515 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 HNRNPH2P55795 449 aaKnown RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 CCDC13Q8IYE1 715 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 AHI1Q8N157 1196 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 TRIM11Q96F44 468 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 ZFYVE19Q96K21 471 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 RBSNQ9H1K0 784 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 IFT122Q9HBG6 1241 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 CNNM1Q9NRU3 951 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 TRPC5Q9UL62 973 aaPredicted RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 ZPR1O75312 459 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 CDKL5O76039 1030 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 TBC1D8O95759 1140 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 GUCY2CP25092 1073 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 TNNC1P63316 161 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 SNX1Q13596 522 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 TRIM25Q14258 630 aaKnown RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 ANKRD20A4Q4UJ75 823 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 ANKRD20A8PQ5CZ79 823 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 ANKRD20A2Q5SQ80 823 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 ANKRD20A1Q5TYW2 823 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 KRT80Q6KB66 452 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 CATSPER3Q86XQ3 398 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 MYLK4Q86YV6 388 aaPredicted RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 GIPC2Q8TF65 315 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 DDX17Q92841 729 aaKnown RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 PPWD1Q96BP3 646 aaKnown RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 TBATAQ96M53 351 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 FAM204AQ9H8W3 233 aa3.64□□□□□ -1.83
PHF3-202ENST00000393387 DDX19AQ9NUU7 478 aaKnown RBP3.64□□□□□ -1.83
PHF3-202ENST00000393387 KANK1Q14678 1352 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 GNGT2O14610 69 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 MCF2LO15068 1137 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 CAND2O75155 1236 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ATP5DP30049 168 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 IGHMBP2P38935 993 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 RAPGEF1Q13905 1077 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 TTF1Q15361 905 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 SEL1L2Q5TEA6 688 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 TSHZ3Q63HK5 1081 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 KIF6Q6ZMV9 814 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 HS2ST1Q7LGA3 356 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 HDDC2Q7Z4H3 204 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ADCK1Q86TW2 530 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 FAM71BQ8TC56 605 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 KIF9Q9HAQ2 790 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ZNF652Q9Y2D9 606 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 UTP11Q9Y3A2 253 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 AGRPO00253 132 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 DDX58O95786 925 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 KRT3P12035 628 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 SAT1P21673 171 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 TAF7Q15545 349 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 ZNF449Q6P9G9 518 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 NBPF5PQ86XG9 351 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 SCYL3Q8IZE3 742 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ST13P4Q8IZP2 240 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 GDAP1Q8TB36 358 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 JDP2Q8WYK2 163 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 SMAD5Q99717 465 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 NAPGQ99747 312 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 POLR3CQ9BUI4 534 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 TMOD2Q9NZR1 351 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 WARS2Q9UGM6 360 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 AMOTL2Q9Y2J4 779 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 IQANK1A0A1B0GTG1 560 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 MCF2P10911 925 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ATP6V1E1P36543 226 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 BSPRYQ5W0U4 402 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 TBC1D1Q86TI0 1168 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 POMGNT1Q8WZA1 660 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 KLHL14Q9P2G3 628 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 CTNND2Q9UQB3 1225 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 RPGRIP1LQ68CZ1 1315 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ST20-MTHFSA0A0A6YYL1 179 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 HIP1O00291 1037 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 STX6O43752 255 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 RAB11FIP3O75154 756 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ITGB3BPQ13352 177 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 DYNC1I2Q13409 638 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 CCDC30Q5VVM6 783 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 NAIF1Q69YI7 327 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 NANOGNBQ7Z5D8 188 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 NLRP7Q8WX94 980 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 P3H4Q92791 437 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 MTRQ99707 1265 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 FERMT1Q9BQL6 677 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 VAT1LQ9HCJ6 419 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 MCM8Q9UJA3 840 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 AGTPBP1Q9UPW5 1226 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 CHMP2BQ9UQN3 213 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 MINDY4BA8MYZ0 360 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms