RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NMT2O60551 498 aa17.58■□□□□ 0.41
MKS1-202ENST00000393119 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.41
MKS1-202ENST00000393119 C15orf52Q6ZUT6 534 aaKnown RBP17.58■□□□□ 0.41
MKS1-202ENST00000393119 STAG1Q8WVM7 1258 aa17.58■□□□□ 0.41
MKS1-202ENST00000393119 CHMP4CQ96CF2 233 aa17.58■□□□□ 0.41
MKS1-202ENST00000393119 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.41
MKS1-202ENST00000393119 PDS5AQ29RF7 1337 aaKnown RBP17.58■□□□□ 0.4
MKS1-202ENST00000393119 EVCP57679 992 aa17.58■□□□□ 0.4
MKS1-202ENST00000393119 CERS5Q8N5B7 392 aa17.58■□□□□ 0.4
MKS1-202ENST00000393119 BAZ2AQ9UIF9 1905 aaKnown RBP17.57■□□□□ 0.4
MKS1-202ENST00000393119 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 NFXL1Q6ZNB6 911 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 GAS2L3Q86XJ1 694 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 PHKBQ93100 1093 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 DYNLL2Q96FJ2 89 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 SAP30BPQ9UHR5 308 aaKnown RBP17.57■□□□□ 0.4
MKS1-202ENST00000393119 ZMYM6O95789 1325 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 MAPKAPK5Q8IW41 473 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 CCDC82Q8N4S0 544 aa17.57■□□□□ 0.4
MKS1-202ENST00000393119 NRXN2Q9P2S2 1712 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 GOLGA6L3A6NEY3 463 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 H0YIN7 160 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
MKS1-202ENST00000393119 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
MKS1-202ENST00000393119 APOA5Q6Q788 366 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 FBXL16Q8N461 479 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
MKS1-202ENST00000393119 FAM217BQ9NTX9 383 aaPredicted RBP17.56■□□□□ 0.4
MKS1-202ENST00000393119 MCM9Q9NXL9 1143 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 PCDHAC2Q9Y5I4 1007 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 SALL1Q9NSC2 1324 aa17.56■□□□□ 0.4
MKS1-202ENST00000393119 RTFDC1Q9BY42 306 aaPredicted RBP17.55■□□□□ 0.4
MKS1-202ENST00000393119 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
MKS1-202ENST00000393119 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
MKS1-202ENST00000393119 BTDP43251 543 aa17.55■□□□□ 0.4
MKS1-202ENST00000393119 BAG6P46379 1132 aa17.55■□□□□ 0.4
MKS1-202ENST00000393119 SCNN1DP51172 638 aa17.55■□□□□ 0.4
MKS1-202ENST00000393119 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
MKS1-202ENST00000393119 SLC44A5Q8NCS7 719 aa17.55■□□□□ 0.4
MKS1-202ENST00000393119 KLHL40Q2TBA0 621 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 TCHHQ07283 1943 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 CHD4Q14839 1912 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 H3BQV1 296 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 USP5P45974 858 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 PLCD1P51178 756 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 CEBPZQ03701 1054 aaKnown RBP17.54■□□□□ 0.4
MKS1-202ENST00000393119 IFFO2Q5TF58 517 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 TMEM63CQ9P1W3 806 aa17.54■□□□□ 0.4
MKS1-202ENST00000393119 ZBTB7AO95365 584 aa17.53■□□□□ 0.4
MKS1-202ENST00000393119 METAP2P50579 478 aaKnown RBP eCLIP17.53■□□□□ 0.4
MKS1-202ENST00000393119 KRT23Q9C075 422 aa17.53■□□□□ 0.4
MKS1-202ENST00000393119 MKRN1Q9UHC7 482 aaKnown RBP17.53■□□□□ 0.4
MKS1-202ENST00000393119 C21orf2O43822 256 aa17.53■□□□□ 0.4
MKS1-202ENST00000393119 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
MKS1-202ENST00000393119 MROH7-TTC4A0A0A0MT08 1334 aa17.53■□□□□ 0.4
MKS1-202ENST00000393119 LTBP1Q14766 1721 aa17.53■□□□□ 0.4
MKS1-202ENST00000393119 NUP133Q8WUM0 1156 aa17.52■□□□□ 0.4
MKS1-202ENST00000393119 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
MKS1-202ENST00000393119 SLX4Q8IY92 1834 aa17.52■□□□□ 0.4
MKS1-202ENST00000393119 TNKSO95271 1327 aa17.52■□□□□ 0.39
MKS1-202ENST00000393119 CPLX1O14810 134 aa17.52■□□□□ 0.39
MKS1-202ENST00000393119 ZBTB43O43298 467 aa17.52■□□□□ 0.39
MKS1-202ENST00000393119 RESTQ13127 1097 aa17.52■□□□□ 0.39
MKS1-202ENST00000393119 TMEM87BQ96K49 555 aa17.52■□□□□ 0.39
MKS1-202ENST00000393119 CNNM2Q9H8M5 875 aa17.52■□□□□ 0.39
MKS1-202ENST00000393119 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.39
MKS1-202ENST00000393119 SLC12A7Q9Y666 1083 aa17.52■□□□□ 0.39
MKS1-202ENST00000393119 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 RRP9O43818 475 aaKnown RBP17.51■□□□□ 0.39
MKS1-202ENST00000393119 PDCP20941 246 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 HMGB2P26583 209 aaKnown RBP17.51■□□□□ 0.39
MKS1-202ENST00000393119 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 WTAPQ15007 396 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 AOC3Q16853 763 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 SKOR2Q2VWA4 1001 aaPredicted RBP17.51■□□□□ 0.39
MKS1-202ENST00000393119 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 ENAHQ8N8S7 591 aaPredicted RBP17.51■□□□□ 0.39
MKS1-202ENST00000393119 ATF5Q9Y2D1 282 aaPredicted RBP17.51■□□□□ 0.39
MKS1-202ENST00000393119 hCG_1642624A0A1W2PR95 340 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 CCDC69A6NI79 296 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 ILDR1Q86SU0 546 aaPredicted RBP17.51■□□□□ 0.39
MKS1-202ENST00000393119 PKNOX2Q96KN3 472 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 COA1Q9GZY4 146 aa17.51■□□□□ 0.39
MKS1-202ENST00000393119 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 G3V3G9 751 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 RHBDL3P58872 404 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 SEC23AQ15436 765 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 NTRK3Q16288 839 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 MRE11P49959 708 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms