RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 NTRK3Q16288 839 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 LRRC24Q50LG9 513 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 IQUBQ8NA54 791 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 MARCKSP29966 332 aaPredicted RBP13.17□□□□□ -0.3
PDCD4-202ENST00000393104 BEND6Q5SZJ8 279 aaPredicted RBP13.17□□□□□ -0.3
PDCD4-202ENST00000393104 NT5DC1Q5TFE4 455 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
PDCD4-202ENST00000393104 BCORQ6W2J9 1755 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 LY75O60449 1722 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 TUBB4AP04350 444 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
PDCD4-202ENST00000393104 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 CCDC34Q96HJ3 373 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 CHD4Q14839 1912 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
PDCD4-202ENST00000393104 PBX1P40424 430 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
PDCD4-202ENST00000393104 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 H7C1W4 665 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 FGAP02671 866 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 CABP4P57796 275 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 SF3A1Q15459 793 aaKnown RBP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 RAB21Q9UL25 225 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 NBPF26B4DH59 902 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 USP5P45974 858 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 UBASH3AP57075 661 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 NBPF15Q8N660 670 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 GPR161Q8N6U8 529 aaKnown RBP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
PDCD4-202ENST00000393104 PSD3Q9NYI0 1048 aa13.16□□□□□ -0.3
PDCD4-202ENST00000393104 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
PDCD4-202ENST00000393104 ADKP55263 362 aaKnown RBP13.15□□□□□ -0.3
PDCD4-202ENST00000393104 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
PDCD4-202ENST00000393104 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 KRBA2Q6ZNG9 492 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 UBXN4Q92575 508 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 DESI2Q9BSY9 194 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
PDCD4-202ENST00000393104 PCDHA5Q9Y5H7 936 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
PDCD4-202ENST00000393104 NR1I3Q14994 352 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.15□□□□□ -0.3
PDCD4-202ENST00000393104 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
PDCD4-202ENST00000393104 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
PDCD4-202ENST00000393104 STRN4Q9NRL3 753 aa13.15□□□□□ -0.31
PDCD4-202ENST00000393104 LAMB2P55268 1798 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 MYL5Q02045 173 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 LONRF2Q1L5Z9 754 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
PDCD4-202ENST00000393104 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
PDCD4-202ENST00000393104 FECHP22830 423 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 HSP90AA4PQ58FG1 418 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 LMBR1LQ6UX01 489 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 TRIM34Q9BYJ4 488 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 PPP6R2O75170 966 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 HAND2P61296 217 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 BRAPQ7Z569 592 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 SRRTQ9BXP5 876 aaKnown RBP13.14□□□□□ -0.31
PDCD4-202ENST00000393104 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
PDCD4-202ENST00000393104 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
PDCD4-202ENST00000393104 RABGGTAQ92696 567 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 A0A087X0B3 334 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 MYO1CO00159 1063 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 ADORA1P30542 326 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 STK38Q15208 465 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 PI16Q6UXB8 463 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
PDCD4-202ENST00000393104 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 HNRNPLLQ8WVV9 542 aaKnown RBP13.13□□□□□ -0.31
PDCD4-202ENST00000393104 ZBTB9Q96C00 473 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 C8orf76Q96K31 380 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 DOCK2Q92608 1830 aa13.13□□□□□ -0.31
PDCD4-202ENST00000393104 SOWAHDA6NJG2 315 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 TEX33O43247 280 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 CUTAO60888 179 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 ZSCAN26Q16670 478 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms