RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 NID2Q14112 1375 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 MINDY4BA8MYZ0 360 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 YEATS4O95619 227 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 PLCB2Q00722 1185 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 FAM160A1Q05DH4 1040 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 SART3Q15020 963 aaKnown RBP29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 STK38Q15208 465 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 KRT40Q6A162 431 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 TFCP2L1Q9NZI6 479 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 ANAPC4Q9UJX5 808 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 WTAPQ15007 396 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 MEX3CQ5U5Q3 659 aaKnown RBP29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 SYNE3Q6ZMZ3 975 aa29.78■■■□□ 2.36
SMARCD3-203ENST00000392811 TNRC6CQ9HCJ0 1690 aaKnown RBP29.77■■■□□ 2.36
SMARCD3-203ENST00000392811 RFC4P35249 363 aa29.77■■■□□ 2.36
SMARCD3-203ENST00000392811 ADALQ6DHV7 355 aa29.77■■■□□ 2.36
SMARCD3-203ENST00000392811 LUZP1Q86V48 1076 aa29.77■■■□□ 2.36
SMARCD3-203ENST00000392811 KCNG4Q8TDN1 519 aa29.77■■■□□ 2.36
SMARCD3-203ENST00000392811 MTA3Q9BTC8 594 aa29.77■■■□□ 2.36
SMARCD3-203ENST00000392811 CBX8Q9HC52 389 aa29.77■■■□□ 2.36
SMARCD3-203ENST00000392811 MYH13Q9UKX3 1938 aa29.76■■■□□ 2.36
SMARCD3-203ENST00000392811 CTAGE5O15320 804 aa29.76■■■□□ 2.36
SMARCD3-203ENST00000392811 ZNF500O60304 480 aaPredicted RBP29.76■■■□□ 2.36
SMARCD3-203ENST00000392811 HIBADHP31937 336 aaKnown RBP29.76■■■□□ 2.36
SMARCD3-203ENST00000392811 TRAPPC3LQ5T215 181 aa29.76■■■□□ 2.36
SMARCD3-203ENST00000392811 SF3A1Q15459 793 aaKnown RBP29.76■■■□□ 2.35
SMARCD3-203ENST00000392811 MRPS27Q92552 414 aaKnown RBP29.76■■■□□ 2.35
SMARCD3-203ENST00000392811 PDS5AQ29RF7 1337 aaKnown RBP29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 STK36Q9NRP7 1315 aa29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 A0A1W2PQ27 194 aa29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 A0A1W2PQ64 194 aa29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 A0A1W2PQD8 194 aa29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 ERICH2A1L162 156 aa29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 SMIM22K7EJ46 135 aa29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 KINO60870 393 aaKnown RBP29.75■■■□□ 2.35
SMARCD3-203ENST00000392811 NPHP1O15259 732 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 SPTLC2O15270 562 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 SSRP1Q08945 709 aaKnown RBP29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 ANO1Q5XXA6 986 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 FAM196AQ6ZSG2 479 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 NSUN4Q96CB9 384 aaKnown RBP29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 BRIP1Q9BX63 1249 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 SLC26A6Q9BXS9 759 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 FMNL1O95466 1100 aaPredicted RBP29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 MPNDQ8N594 471 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 TAOK2Q9UL54 1235 aa29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.74■■■□□ 2.35
SMARCD3-203ENST00000392811 UBE2Q2LH0YL09 131 aa29.73■■■□□ 2.35
SMARCD3-203ENST00000392811 IFNAR1P17181 557 aa29.73■■■□□ 2.35
SMARCD3-203ENST00000392811 FMR1NBQ8N0W7 255 aaPredicted RBP29.73■■■□□ 2.35
SMARCD3-203ENST00000392811 TMTC2Q8N394 836 aa29.73■■■□□ 2.35
SMARCD3-203ENST00000392811 DNAJC25Q9H1X3 360 aa29.73■■■□□ 2.35
SMARCD3-203ENST00000392811 AFF2P51816 1311 aa29.73■■■□□ 2.35
SMARCD3-203ENST00000392811 MECOMQ03112 1051 aa29.72■■■□□ 2.35
SMARCD3-203ENST00000392811 RTN1Q16799 776 aa29.72■■■□□ 2.35
SMARCD3-203ENST00000392811 BAZ2AQ9UIF9 1905 aaKnown RBP29.72■■■□□ 2.35
SMARCD3-203ENST00000392811 NFIXQ14938 502 aa29.72■■■□□ 2.35
SMARCD3-203ENST00000392811 ESR2Q92731 530 aa29.72■■■□□ 2.35
SMARCD3-203ENST00000392811 UBAC1Q9BSL1 405 aa29.72■■■□□ 2.35
SMARCD3-203ENST00000392811 CYP2D7A0A087X1C5 515 aa29.71■■■□□ 2.35
SMARCD3-203ENST00000392811 CHAF1AQ13111 956 aaPredicted RBP29.71■■■□□ 2.35
SMARCD3-203ENST00000392811 TRIM29Q14134 588 aa29.71■■■□□ 2.35
SMARCD3-203ENST00000392811 TXNRD3Q86VQ6 643 aa29.71■■■□□ 2.35
SMARCD3-203ENST00000392811 A0A1B0GVL5 298 aa29.71■■■□□ 2.35
SMARCD3-203ENST00000392811 ONECUT3O60422 494 aaPredicted RBP29.71■■■□□ 2.35
SMARCD3-203ENST00000392811 ZNF165P49910 485 aa29.71■■■□□ 2.35
SMARCD3-203ENST00000392811 DUOX1Q9NRD9 1551 aa29.7■■■□□ 2.35
SMARCD3-203ENST00000392811 IRS2Q9Y4H2 1338 aa29.7■■■□□ 2.34
SMARCD3-203ENST00000392811 ZNF654Q8IZM8 581 aa29.7■■■□□ 2.34
SMARCD3-203ENST00000392811 LRRC4BQ9NT99 713 aa29.7■■■□□ 2.34
SMARCD3-203ENST00000392811 NDUFA8P51970 172 aa29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 GNL2Q13823 731 aaKnown RBP29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 SEC23AQ15436 765 aa29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 SEPT12Q8IYM1 358 aa29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 TNKSO95271 1327 aa29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 U2AF2P26368 475 aaKnown RBP eCLIP29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 RCAN1P53805 252 aa29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 WASF1Q92558 559 aa29.69■■■□□ 2.34
SMARCD3-203ENST00000392811 CAVIN2O95810 425 aa29.68■■■□□ 2.34
SMARCD3-203ENST00000392811 PRDX5P30044 214 aa29.68■■■□□ 2.34
SMARCD3-203ENST00000392811 GUCY1A2P33402 732 aa29.68■■■□□ 2.34
SMARCD3-203ENST00000392811 SLC39A14Q15043 492 aa29.68■■■□□ 2.34
SMARCD3-203ENST00000392811 TDRD7Q8NHU6 1098 aaKnown RBP29.68■■■□□ 2.34
SMARCD3-203ENST00000392811 NAP1L5Q96NT1 182 aaPredicted RBP29.68■■■□□ 2.34
SMARCD3-203ENST00000392811 AXDND1Q5T1B0 1012 aaPredicted RBP29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 CTR9Q6PD62 1173 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 NBPF11Q86T75 865 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 STX1AQ16623 288 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 SLC51AQ86UW1 340 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 TRIM22Q8IYM9 498 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 CNBD1Q8NA66 436 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 FANCBQ8NB91 859 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 NUP133Q8WUM0 1156 aa29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 BCL11BQ9C0K0 894 aaPredicted RBP29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 AATFQ9NY61 560 aaKnown RBP eCLIP29.67■■■□□ 2.34
SMARCD3-203ENST00000392811 MAST2Q6P0Q8 1798 aa29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 CCDC196A0A1B0GTZ2 297 aa29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 OFD1O75665 1012 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms